RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.43
NUP54-214ENST00000514307 SMARCAD1Q9H4L7 1026 aa17.71■□□□□ 0.43
NUP54-214ENST00000514307 MRPL44Q9H9J2 332 aaKnown RBP17.71■□□□□ 0.43
NUP54-214ENST00000514307 DGAT1O75907 488 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 ABCD1P33897 745 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 ZNF131P52739 623 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 ALCAMQ13740 583 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 UGCGQ16739 394 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 OLFML2BQ68BL8 750 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
NUP54-214ENST00000514307 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
NUP54-214ENST00000514307 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 KIAA0895Q8NCT3 520 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 KIFAP3Q92845 792 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 GLG1Q92896 1179 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 TRIM47Q96LD4 638 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 SRRTQ9BXP5 876 aaKnown RBP17.7■□□□□ 0.42
NUP54-214ENST00000514307 C17orf75Q9HAS0 396 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 PCDHA2Q9Y5H9 948 aa17.7■□□□□ 0.42
NUP54-214ENST00000514307 RBBP6Q7Z6E9 1792 aaKnown RBP17.7■□□□□ 0.42
NUP54-214ENST00000514307 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 AP5Z1O43299 807 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 OATP04181 439 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 ZNF18P17022 549 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 SCP2P22307 547 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 SMTNP53814 917 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 ODR4Q5SWX8 454 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 UTP14CQ5TAP6 766 aaKnown RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 ANKRD40Q6AI12 368 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 ANO5Q75V66 913 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 SFR1Q86XK3 245 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 NPLOC4Q8TAT6 608 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 USP6NLQ92738 828 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 HPS3Q969F9 1004 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 EMID1Q96A84 441 aaPredicted RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 MED15Q96RN5 788 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 GPR20Q99678 358 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 CYP26B1Q9NR63 512 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 PDGFCQ9NRA1 345 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
NUP54-214ENST00000514307 TBC1D7Q9P0N9 293 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 IFNKQ9P0W0 207 aa17.69■□□□□ 0.42
NUP54-214ENST00000514307 SFI1A8K8P3 1242 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 EIF3DO15371 548 aaKnown RBP eCLIP17.68■□□□□ 0.42
NUP54-214ENST00000514307 ZNF862O60290 1169 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 SORBS3O60504 671 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 HIP1RO75146 1068 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 LGR5O75473 907 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 STBD1O95210 358 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 ARIH2O95376 493 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 PLS3P13797 630 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 RFC5P40937 340 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 PRKCEQ02156 737 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
NUP54-214ENST00000514307 LRRC41Q15345 812 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 CDKAL1Q5VV42 579 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 TTI2Q6NXR4 508 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 ZNF720Q7Z2F6 126 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 FAM178BQ8IXR5 827 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 JPH2Q9BR39 696 aaPredicted RBP17.68■□□□□ 0.42
NUP54-214ENST00000514307 SEPT9Q9UHD8 586 aaPredicted RBP17.68■□□□□ 0.42
NUP54-214ENST00000514307 GJD2Q9UKL4 321 aa17.68■□□□□ 0.42
NUP54-214ENST00000514307 CALUO43852 315 aaPredicted RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 USO1O60763 962 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 GNA14O95837 355 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 RPL13P26373 211 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 HOXD10P28358 340 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 PSMC4P43686 418 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 NPEPPSP55786 919 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 FKBP3Q00688 224 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 ARHGEF6Q15052 776 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 KNOP1Q1ED39 458 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 FAM102BQ5T8I3 360 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 BBXQ8WY36 941 aaPredicted RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 IFT74Q96LB3 600 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 ZIC5Q96T25 663 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 HSD3B7Q9H2F3 369 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
NUP54-214ENST00000514307 NRBP1Q9UHY1 535 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 IGSF9BQ9UPX0 1349 aa17.67■□□□□ 0.42
NUP54-214ENST00000514307 H0YCG3 227 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 PDXKO00764 312 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 AOC2O75106 756 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 GCNT3O95395 438 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 CYP2B6P20813 491 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 RTP1P59025 263 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms