RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 TSR1Q2NL82 804 aaKnown RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 SYT10Q6XYQ8 523 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 FRMD5Q7Z6J6 570 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 TIPINQ9BVW5 301 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 STRA6Q9BX79 667 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
VCAN-211ENST00000513984 SLC16A3O15427 465 aaKnown RBP16.46■□□□□ 0.23
VCAN-211ENST00000513984 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 PPP1R37O75864 691 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 NR3C1P04150 777 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 RPL13P26373 211 aaKnown RBP16.46■□□□□ 0.23
VCAN-211ENST00000513984 KCNA1Q09470 495 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
VCAN-211ENST00000513984 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.23
VCAN-211ENST00000513984 CHP1Q99653 195 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 EDEM3Q9BZQ6 932 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 SPATC1LQ9H0A9 340 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 ANKEF1Q9NU02 776 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 PCDHA10Q9Y5I2 948 aa16.46■□□□□ 0.23
VCAN-211ENST00000513984 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 SPATA31C2B4DYI2 1134 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 ERCC3P19447 782 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 HNRNPH3P31942 346 aaKnown RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 CDK17Q00537 523 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 ARMC9Q7Z3E5 817 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 EPHB6O15197 1021 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 ICAM3P32942 547 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 HERVK_113P62684 666 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 MOGSQ13724 837 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
VCAN-211ENST00000513984 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 LARSQ9P2J5 1176 aaKnown RBP16.45■□□□□ 0.22
VCAN-211ENST00000513984 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
VCAN-211ENST00000513984 CTIFO43310 598 aaKnown RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 PEX10O60683 326 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 CNMDO75829 334 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 NDUFA10O95299 355 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 ALCAMQ13740 583 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 STXBP2Q15833 593 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 ACRBPQ8NEB7 543 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 OPTNQ96CV9 577 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 ARMCX3Q9UH62 379 aaPredicted RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 DNAI1Q9UI46 699 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
VCAN-211ENST00000513984 EPN1Q9Y6I3 576 aaPredicted RBP16.44■□□□□ 0.22
VCAN-211ENST00000513984 BACH1O14867 736 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 FANCGO15287 622 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
VCAN-211ENST00000513984 DKC1O60832 514 aaKnown RBP eCLIP16.43■□□□□ 0.22
VCAN-211ENST00000513984 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
VCAN-211ENST00000513984 AKAP3O75969 853 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
VCAN-211ENST00000513984 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 GPR162Q16538 588 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
VCAN-211ENST00000513984 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
VCAN-211ENST00000513984 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 NEK11Q8NG66 645 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 MCM3APO60318 1980 aa16.43■□□□□ 0.22
VCAN-211ENST00000513984 PSAPP07602 524 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 PLS3P13797 630 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 EDNRBP24530 442 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
VCAN-211ENST00000513984 CCDC170Q8IYT3 715 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 GOLGA5Q8TBA6 731 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 BAP1Q92560 729 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 MKNK1Q9BUB5 465 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 GBP3Q9H0R5 595 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 TMEM150BA6NC51 233 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 K7ENM7 598 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 CLIC2O15247 247 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 SLC25A27O95847 323 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms