RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 EFCAB14O75071 495 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 BAIAP3O94812 1187 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 CYP2C9P11712 490 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 CKBP12277 381 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 ACTN1P12814 892 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 CSF2RAP15509 400 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 MARK3P27448 753 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 CHMP4BP1P59074 171 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 FOXK1P85037 733 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 PLCB4Q15147 1175 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 EARS2Q5JPH6 523 aaKnown RBP9.21□□□□□ -0.94
NEDD4-210ENST00000513957 ZNF484Q5JVG2 852 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 SWSAP1Q6NVH7 229 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 MIER3Q7Z3K6 550 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 HSCBQ8IWL3 235 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 EXOC8Q8IYI6 725 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 TET1Q8NFU7 2136 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 WNT8AQ9H1J5 351 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 UNC45AQ9H3U1 944 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 SETD4Q9NVD3 440 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 VAV3Q9UKW4 847 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 PCDHA12Q9UN75 941 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 SQORQ9Y6N5 450 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 TRIOBPQ9H2D6 2365 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 TREHO43280 583 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 CXCL10P02778 98 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 OATP04181 439 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 P4HBP07237 508 aaKnown RBP9.2□□□□□ -0.94
NEDD4-210ENST00000513957 INSRRP14616 1297 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 CYP2C18P33260 490 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 PSMC5P62195 406 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 SPIRE1Q08AE8 756 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 TRIM71Q2Q1W2 868 aaKnown RBP9.2□□□□□ -0.94
NEDD4-210ENST00000513957 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 FAM26DQ5JW98 314 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 RASIP1Q5U651 963 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
NEDD4-210ENST00000513957 BRAPQ7Z569 592 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 NME8Q8N427 588 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 USP38Q8NB14 1042 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 TMC2Q8TDI7 906 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 HERVK_113Q902F9 699 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 DHX38Q92620 1227 aaKnown RBP9.2□□□□□ -0.94
NEDD4-210ENST00000513957 HAS1Q92839 578 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 APBB2Q92870 758 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 MTMR9Q96QG7 549 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 JPH2Q9BR39 696 aaPredicted RBP9.2□□□□□ -0.94
NEDD4-210ENST00000513957 RAB34Q9BZG1 259 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 NRBP2Q9NSY0 501 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 GABBR1Q9UBS5 961 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 TELO2Q9Y4R8 837 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 PCDHA2Q9Y5H9 948 aa9.2□□□□□ -0.94
NEDD4-210ENST00000513957 PTPRSQ13332 1948 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TMEM265A0A087WTH1 108 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 RSPH10B2B2RC85 870 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 M0QZ92 97 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 CHMP2AO43633 222 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 BMP15O95972 392 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 FGBP02675 491 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 OR52Z1P0C646 297 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 RSPH10BP0C881 870 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 MUTP22033 750 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TMOD1P28289 359 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 MCM7P33993 719 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 THPOP40225 353 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 PRPHP41219 470 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 QARSP47897 775 aaKnown RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 FOSBP53539 338 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 CCL23P55773 120 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 SMAD3P84022 425 aaKnown RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 CDC42EP1Q00587 391 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 PRKCEQ02156 737 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 EPHA7Q15375 998 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TMEM266Q2M3C6 531 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TTC38Q5R3I4 469 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TMEM240Q5SV17 173 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 MARCH8Q5T0T0 291 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 IER5Q5VY09 327 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 CNKSR3Q6P9H4 555 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 C4orf19Q8IY42 314 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 RNPC3Q96LT9 517 aaKnown RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 NIFKQ9BYG3 293 aaKnown RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 TTC12Q9H892 705 aaPredicted RBP9.19□□□□□ -0.94
NEDD4-210ENST00000513957 UMODL1Q5DID0 1318 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 KDM3AQ9Y4C1 1321 aa9.19□□□□□ -0.94
NEDD4-210ENST00000513957 ABHD14A-ACY1A0A1B0GW23 586 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 KIF28PB7ZC32 967 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 GAS2O43903 313 aaKnown RBP9.18□□□□□ -0.94
NEDD4-210ENST00000513957 LYPLA2O95372 231 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
NEDD4-210ENST00000513957 PTGDRQ13258 359 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 COL4A6Q14031 1691 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 SHHQ15465 462 aa9.18□□□□□ -0.94
NEDD4-210ENST00000513957 ODR4Q5SWX8 454 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms