RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ZDHHC14Q8IZN3 488 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 ADAM2Q99965 735 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 JPH1Q9HDC5 661 aaPredicted RBP12.56□□□□□ -0.4
DDX41-216ENST00000513562 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 TMEM161AQ9NX61 479 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
DDX41-216ENST00000513562 NOC2LQ9Y3T9 749 aaKnown RBP12.56□□□□□ -0.4
DDX41-216ENST00000513562 HCFC2Q9Y5Z7 792 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 PLXNA4Q9HCM2 1894 aa12.56□□□□□ -0.4
DDX41-216ENST00000513562 PTPRZ1P23471 2315 aaPredicted RBP12.55□□□□□ -0.4
DDX41-216ENST00000513562 GVINP1Q7Z2Y8 2422 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 RPS6KA5O75582 802 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 ASGR2P07307 311 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 FGFR1P11362 822 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 HDAC1Q13547 482 aaPredicted RBP12.55□□□□□ -0.4
DDX41-216ENST00000513562 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 PLPPR4Q7Z2D5 763 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 TMEM40Q8WWA1 233 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 MFSD1Q9H3U5 465 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 ELAC1Q9H777 363 aaKnown RBP12.55□□□□□ -0.4
DDX41-216ENST00000513562 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 JADE2Q9NQC1 790 aa12.55□□□□□ -0.4
DDX41-216ENST00000513562 MYH6P13533 1939 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 HIP1O00291 1037 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 MAFGO15525 162 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 PPM1AP35813 382 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 MTHFRP42898 656 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 FAM189BP81408 668 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 ODR4Q5SWX8 454 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
DDX41-216ENST00000513562 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 ST3GAL5Q9UNP4 418 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
DDX41-216ENST00000513562 RIF1Q5UIP0 2472 aaKnown RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 IFIT3O14879 490 aaKnown RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 GPR182O15218 404 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 AOC1P19801 751 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 PBX3P40426 434 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 STAT5BP51692 787 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 ACTR2P61160 394 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 KRT17Q04695 432 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 TRDNQ13061 729 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 SMC1AQ14683 1233 aaKnown RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 KIAA1841Q6NSI8 718 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 LRRC55Q6ZSA7 311 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 KIAA0319LQ8IZA0 1049 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 LRRC43Q8N309 656 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 MRPL43Q8N983 215 aaKnown RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 RMDN1Q96DB5 314 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
DDX41-216ENST00000513562 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 IL25Q9H293 177 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 USTQ9Y2C2 406 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 DOCK5Q9H7D0 1870 aa12.53□□□□□ -0.4
DDX41-216ENST00000513562 ERICH2A1L162 156 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 HOXA2O43364 376 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
DDX41-216ENST00000513562 WEE2P0C1S8 567 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 NPR3P17342 541 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 KLRC1P26715 233 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 SLC26A2P50443 739 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 DSC3Q14574 896 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 WTAPQ15007 396 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 ANGPT1Q15389 498 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 FLCNQ8NFG4 579 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 KCNH7Q9NS40 1196 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 SPG21Q9NZD8 308 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
DDX41-216ENST00000513562 FAM186AA6NE01 2351 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 NFASCO94856 1347 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 ZNF292O60281 2723 aa12.52□□□□□ -0.41
DDX41-216ENST00000513562 IGKV6D-21A0A0A0MT36 114 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 PI15O43692 258 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 EOMESO95936 686 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 ARP10275 920 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms