RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HABP4Q5JVS0 413 aaKnown RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 CWF19L1Q69YN2 538 aaKnown RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 SND1Q7KZF4 910 aaKnown RBP eCLIP5□□□□□ -1.61
PDLIM5-218ENST00000513341 LIMS2Q7Z4I7 341 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 TMEM192Q8IY95 271 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 FBXO27Q8NI29 283 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 JDP2Q8WYK2 163 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 PPP4R1LQ9P1A2 415 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 KLRG2A4D1S0 409 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 LAMTOR5O43504 91 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 ALDH1B1P30837 517 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 EIF5P55010 431 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 DAB2P98082 770 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 KLF10Q13118 480 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 LRRFIP1Q32MZ4 808 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 ANKRD39Q53RE8 183 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 PRR5LQ6MZQ0 368 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 PLEKHH3Q7Z736 793 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 CABP7Q86V35 215 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF575Q86XF7 245 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 DNAJC10Q8IXB1 793 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 C7orf61Q8IZ16 206 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 RGS22Q8NE09 1264 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 PTCHD1Q96NR3 888 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 TESK2Q96S53 571 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 C11orf84Q9BUA3 381 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 DSCC1Q9BVC3 393 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 TEX13AQ9BXU3 409 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 PODXL2Q9NZ53 605 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 PGAP2Q9UHJ9 254 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 SLX4Q8IY92 1834 aa4.99□□□□□ -1.61
PDLIM5-218ENST00000513341 RNF123Q5XPI4 1314 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 LTBP1Q14766 1721 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 MEIS3P2A8K0S8 358 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 SHOXO15266 292 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 PPM1GO15355 546 aaPredicted RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 STARD3NLO95772 234 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 CYP2C8P10632 490 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 NME1P15531 152 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 NPR1P16066 1061 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 IARSP41252 1262 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 EIF6P56537 245 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 SOX10P56693 466 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 ST5P78524 1137 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 GRM1Q13255 1194 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 SMN1Q16637 294 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 C1orf141Q5JVX7 400 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 PRR31Q5SQ13 230 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 REXO1Q8N1G1 1221 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 KYQ8NBH2 561 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 SLC6A18Q96N87 628 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 PSMD1Q99460 953 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 VPS33BQ9H267 617 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 BRMS1Q9HCU9 246 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 RNF19AQ9NV58 838 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 COL15A1P39059 1388 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 ARFGEF2Q9Y6D5 1785 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 ANKRD31Q8N7Z5 1873 aa4.98□□□□□ -1.61
PDLIM5-218ENST00000513341 TJP1Q07157 1748 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 CARMIL3Q8ND23 1372 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 GREM1O60565 184 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 TACR1P25103 407 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 IL6STP40189 918 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF530Q6P9A1 599 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 CLEC4GQ6UXB4 293 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 CTU1Q7Z7A3 348 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 SYNE4Q8N205 404 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 CNBD1Q8NA66 436 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 LCORQ96JN0 433 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 DHRS1Q96LJ7 313 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 GORASP1Q9BQQ3 440 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 GZF1Q9H116 711 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 C11orf21Q9P2W6 132 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 HS3ST3A1Q9Y663 406 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF541Q9H0D2 1346 aa4.97□□□□□ -1.61
PDLIM5-218ENST00000513341 AKAP11Q9UKA4 1901 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 CELF2O95319 508 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 ERCC3P19447 782 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 EPS15P42566 896 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 SELENOPP49908 381 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 INHBEP58166 350 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 POU4F1Q01851 419 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 FAM160A1Q05DH4 1040 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 SMAD4Q13485 552 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 EIF4A2Q14240 407 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 TMCO4Q5TGY1 634 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 TBC1D9BQ66K14 1250 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 INTS3Q68E01 1043 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 NPM2Q86SE8 214 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 USP48Q86UV5 1035 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 TXNDC5Q8NBS9 432 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 FCRL3Q96P31 734 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 SLC52A2Q9HAB3 445 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 ZNF277Q9NRM2 450 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 SUCOQ9UBS9 1254 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 ZBTB1Q9Y2K1 713 aa4.96□□□□□ -1.62
PDLIM5-218ENST00000513341 ANKRD26Q9UPS8 1709 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms