RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 HIF1AQ16665 826 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 SCLYQ96I15 445 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 IWS1Q96ST2 819 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 INSM2Q96T92 566 aaPredicted RBP10.94□□□□□ -0.66
TRIO-220ENST00000512979 AMNQ9BXJ7 453 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 DNAJC25Q9H1X3 360 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 MAD2L2Q9UI95 211 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 AK5Q9Y6K8 562 aa10.94□□□□□ -0.66
TRIO-220ENST00000512979 ERICH2A1L162 156 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 OPLAHO14841 1288 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 CFBP00751 764 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 PHKA2P46019 1235 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 RNF144AP50876 292 aaPredicted RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 STXBP2Q15833 593 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 LY6KQ17RY6 165 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 NFRKBQ6P4R8 1299 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 CCDC62Q6P9F0 684 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 AFG1LQ8WV93 481 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 UBXN4Q92575 508 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 FRMD6Q96NE9 622 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
TRIO-220ENST00000512979 LAMA2P24043 3122 aaKnown RBP10.93□□□□□ -0.66
TRIO-220ENST00000512979 ZBTB5O15062 677 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 SGSM2O43147 1006 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 PPP1R11O60927 126 aaPredicted RBP10.92□□□□□ -0.66
TRIO-220ENST00000512979 CPNE3O75131 537 aaKnown RBP10.92□□□□□ -0.66
TRIO-220ENST00000512979 GH1P01241 217 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 MMP3P08254 477 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 CTSHP09668 335 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 IDH3AP50213 366 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 ARHGAP1Q07960 439 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 GRM4Q14833 912 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 WTAPQ15007 396 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 RAB30Q15771 203 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 CHST3Q7LGC8 479 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 CRELD1Q96HD1 420 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 CCSER2Q9H7U1 834 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 PCDHA1Q9Y5I3 950 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 TAF6LQ9Y6J9 622 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
TRIO-220ENST00000512979 E7EWF7 191 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
TRIO-220ENST00000512979 HSD17B4P51659 736 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 PTPN11Q06124 597 aaPredicted RBP10.91□□□□□ -0.66
TRIO-220ENST00000512979 SART3Q15020 963 aaKnown RBP10.91□□□□□ -0.66
TRIO-220ENST00000512979 SLC35G1Q2M3R5 365 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 VWCEQ96DN2 955 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 PIGSQ96S52 555 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
TRIO-220ENST00000512979 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 DDX41Q9UJV9 622 aaKnown RBP10.91□□□□□ -0.66
TRIO-220ENST00000512979 USP20Q9Y2K6 914 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
TRIO-220ENST00000512979 CDH23Q9H251 3354 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 GDF9O60383 454 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 PFKMP08237 780 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 POLR2MP0CAP2 368 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 MYCLP12524 364 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 RABGGTBP53611 331 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 GHRHRQ02643 423 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 TROAPQ12815 778 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 BFSP2Q13515 415 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 DGKDQ16760 1214 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIO-220ENST00000512979 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 IER5Q5VY09 327 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 KAT2BQ92831 832 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.66
TRIO-220ENST00000512979 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 PRDM12Q9H4Q4 367 aa10.9□□□□□ -0.66
TRIO-220ENST00000512979 RIOX1Q9H6W3 641 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms