RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TAF11Q15544 211 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 RNF168Q8IYW5 571 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SEL1LQ9UBV2 794 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ATP8B3O60423 1300 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 MAGEA9P43362 315 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ARL4CP56559 192 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 PEX3P56589 373 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 AP1ARQ63HQ0 302 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SH3RF3Q8TEJ3 882 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 AP5M1Q9H0R1 490 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SPATS2LQ9NUQ6 558 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ZBTB24O43167 697 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ACSL3O95573 720 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ASNSP08243 561 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 PRELPP51888 382 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SFR1Q86XK3 245 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SIX6OS1Q8N1H7 587 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ZDHHC9Q9Y397 364 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 CYP27B1O15528 508 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 LMNAP02545 664 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 MMEP08473 750 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 PEX19P40855 299 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 TFDP2Q14188 446 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ZBTB33Q86T24 672 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 TMEM35BQ8NCS4 154 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 MORC4Q8TE76 937 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 TTC25Q96NG3 672 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 SNX24Q9Y343 169 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 COASYQ13057 564 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 IQCB1Q15051 598 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 NBPF9Q3BBW0 867 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 PALLDQ8WX93 1383 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 POTEMA6NI47 508 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 RFX1P22670 979 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 HLFQ16534 295 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 DEPDC1BQ8WUY9 529 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 FAM96AQ9H5X1 160 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 ANAPC7Q9UJX3 599 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 PSMA2P25787 234 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 KNOP1Q1ED39 458 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 OSBPL9Q96SU4 736 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 GINM1Q9NU53 330 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 LAMC1P11047 1609 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 PDCLQ13371 301 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 SPOPLQ6IQ16 392 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 ELAC2Q9BQ52 826 aaKnown RBP13.38□□□□□ -0.27
COL11A1-210ENST00000512756 HECW2Q9P2P5 1572 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 CDC27P30260 824 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 KCNJ6P48051 423 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 RPAINQ86UA6 219 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 BARHL2Q9NY43 387 aa13.38□□□□□ -0.27
COL11A1-210ENST00000512756 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 MED14O60244 1454 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 SRGAP2O75044 1071 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ART3Q13508 389 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CRLF3Q8IUI8 442 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CFAP36Q96G28 342 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 SAYSD1Q9NPB0 183 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CALB1P05937 261 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 C4orf50Q6ZRC1 276 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ABI1Q8IZP0 508 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms