RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZNF302Q9NR11 478 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 ITGB1P05556 798 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 GNA11P29992 359 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 SETQ01105 290 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-216ENST00000512683 NFX1Q12986 1120 aaKnown RBP14.28□□□□□ -0.12
VEGFA-216ENST00000512683 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-216ENST00000512683 TYW1BQ6NUM6 668 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 PLA2G4DQ86XP0 818 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 FBXL16Q8N461 479 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 KLHL23Q8NBE8 558 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 POF1BQ8WVV4 589 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 KCNB2Q92953 911 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 MSLNLQ96KJ4 702 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 ZMYND12Q9H0C1 365 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 C6orf50Q9HD87 102 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 ERVK-5Q9HDB9 667 aa14.28□□□□□ -0.12
VEGFA-216ENST00000512683 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
VEGFA-216ENST00000512683 MAFBQ9Y5Q3 323 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-216ENST00000512683 MICAL3Q7RTP6 2002 aa14.27□□□□□ -0.12
VEGFA-216ENST00000512683 KAT6AQ92794 2004 aa14.27□□□□□ -0.12
VEGFA-216ENST00000512683 DENND3A2RUS2 1198 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 IPO5O00410 1097 aaKnown RBP14.27□□□□□ -0.13
VEGFA-216ENST00000512683 DHX15O43143 795 aaKnown RBP14.27□□□□□ -0.13
VEGFA-216ENST00000512683 HOXA2O43364 376 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 CCNE2O96020 404 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 IRS1P35568 1242 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 NDUFV1P49821 464 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 CDC42EP1Q00587 391 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 SWSAP1Q6NVH7 229 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 BMP8AQ7Z5Y6 402 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 BICD2Q8TD16 824 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 RSPH1Q8WYR4 309 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 FAM167AQ96KS9 214 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 TMX1Q9H3N1 280 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 IGFLR1Q9H665 355 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-216ENST00000512683 TCEAL9Q9UHQ7 104 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 PUF60Q9UHX1 559 aaKnown RBP14.27□□□□□ -0.13
VEGFA-216ENST00000512683 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 LZTS1Q9Y250 596 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 PCDHA10Q9Y5I2 948 aa14.27□□□□□ -0.13
VEGFA-216ENST00000512683 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 C9IYK1 514 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 PSAPP07602 524 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 TMOD1P28289 359 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 CIITAP33076 1130 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 DLX2Q07687 328 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM62Q0P6H9 643 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 SMRP1Q8NCR6 262 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 TRAPPC12Q8WVT3 735 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 ADAM2Q99965 735 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 ZNF577Q9BSK1 485 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 ATP6V0A4Q9HBG4 840 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 NOC2LQ9Y3T9 749 aaKnown RBP14.26□□□□□ -0.13
VEGFA-216ENST00000512683 SIP14410 1827 aa14.26□□□□□ -0.13
VEGFA-216ENST00000512683 KLF18A0A0U1RQI7 1052 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
VEGFA-216ENST00000512683 TBX10O75333 385 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 CPA1P15085 419 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 ATF7P17544 494 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-216ENST00000512683 DNAJB1P25685 340 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 FGD1P98174 961 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 PLCB3Q01970 1234 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 CBX2Q14781 532 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM184AQ6ZMB5 413 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-216ENST00000512683 EDAQ92838 391 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 UIMC1Q96RL1 719 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 PRRX2Q99811 253 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 TLE6Q9H808 572 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 MUC6Q6W4X9 2439 aa14.25□□□□□ -0.13
VEGFA-216ENST00000512683 TTC3P53804 2025 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 COL4A4P53420 1690 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 ZBTB42B2RXF5 422 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 GPR32O75388 356 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 C22orf31O95567 290 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 SRGAP2BP0DMP2 458 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 LAG3P18627 525 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 ATP4AP20648 1035 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 CDC27P30260 824 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 HSPA4P34932 840 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 METAP2P50579 478 aaKnown RBP eCLIP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 USP11P51784 963 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 SPOUT1Q5T280 376 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms