RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SNRNP48Q6IEG0 339 aaKnown RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 DEPTORQ8TB45 409 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 GLIS2Q9BZE0 524 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 DPEP1P16444 411 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 PRPHP41219 470 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 SOX10P56693 466 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 USP37Q86T82 979 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 FAM84AQ96KN4 292 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 RUSC1Q9BVN2 902 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 ATP8A1Q9Y2Q0 1164 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 UTP11Q9Y3A2 253 aaKnown RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 ATF7P17544 494 aaPredicted RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 MXI1P50539 228 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 PLTPP55058 493 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 PAK2Q13177 524 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 CEP55Q53EZ4 464 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 BCAS4Q8TDM0 211 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 METTL14Q9HCE5 456 aaKnown RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 SERPING1P05155 500 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 CALCOCO2Q13137 446 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 PURBQ96QR8 312 aaKnown RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 OSBPL9Q96SU4 736 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 DUSP9Q99956 384 aaKnown RBP12.98□□□□□ -0.33
PRDM16-207ENST00000512462 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
PRDM16-207ENST00000512462 MSH4O15457 936 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 CYP11B2P19099 503 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 KLRC1P26715 233 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 IFNAR2P48551 515 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 CCT5P48643 541 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 COG2Q14746 738 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ZNF772Q68DY9 489 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 DCUN1D2Q6PH85 259 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ZKSCAN4Q969J2 545 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 hCG_1984214I3L0E3 225 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 HIP1RO75146 1068 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ARP10275 920 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 TRPC3Q13507 836 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ZNF713Q8N859 430 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ZNF653Q96CK0 615 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 PDGFDQ9GZP0 370 aaPredicted RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 RNF146Q9NTX7 359 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 BLOC1S4Q9NUP1 217 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 BAZ2AQ9UIF9 1905 aaKnown RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 A0A087X0T9 212 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 FGGP02679 453 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 FAM228BP0C875 321 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 Q3C1V9 767 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 PAF1Q8N7H5 531 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 ADAM33Q9BZ11 813 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 WDR11Q9BZH6 1224 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 BCAS3Q9H6U6 928 aa12.97□□□□□ -0.33
PRDM16-207ENST00000512462 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
PRDM16-207ENST00000512462 E7EVH7 732 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 FAM86B1E9PN63 330 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 VIMP08670 466 aaKnown RBP12.96□□□□□ -0.33
PRDM16-207ENST00000512462 FAM86B2P0C5J1 330 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 IL1R1P14778 569 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 GGCXP38435 758 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 MTM1Q13496 603 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 NPY5RQ15761 445 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 DALRD3Q5D0E6 543 aaKnown RBP12.96□□□□□ -0.33
PRDM16-207ENST00000512462 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 SH2D3CQ8N5H7 860 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 ANKRD42Q8N9B4 389 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
PRDM16-207ENST00000512462 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.33
PRDM16-207ENST00000512462 NUP98P52948 1817 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 TISP43B9A030 160 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 PRELPP51888 382 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 PSMD2Q13200 908 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
PRDM16-207ENST00000512462 INO80BQ9C086 356 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms