RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 LRWD1Q9UFC0 647 aa8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SEPT9Q9UHD8 586 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-231ENST00000512340 SMIM35A0A1B0GVV1 85 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 MBLAC1A4D2B0 266 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 FAM205CA6NFA0 338 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 KIF28PB7ZC32 967 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 TREHO43280 583 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 BAIAP3O94812 1187 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 IQCF3P0C7M6 154 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 CKBP12277 381 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 CSF2RAP15509 400 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 HOXC8P31273 242 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 TECP42680 631 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 POLGP54098 1239 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 IKBKEQ14164 716 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 MTHFD1LQ6UB35 978 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 TRMT1LQ7Z2T5 733 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 TCP11Q8WWU5 503 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 HAS1Q92839 578 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 APBB2Q92870 758 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 CEP170P1Q96L14 293 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 AK8Q96MA6 479 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 MTMR9Q96QG7 549 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 PCYT2Q99447 389 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 EIF2AK1Q9BQI3 630 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 LXNQ9BS40 222 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 POLR3CQ9BUI4 534 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 NIFKQ9BYG3 293 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 INO80BQ9C086 356 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 NT5C3AQ9H0P0 336 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.35□□□□□ -1.07
NR1I3-231ENST00000512340 ANKEF1Q9NU02 776 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 CFAP45Q9UL16 551 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 AKT3Q9Y243 479 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 SQORQ9Y6N5 450 aa8.35□□□□□ -1.07
NR1I3-231ENST00000512340 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 KDM3AQ9Y4C1 1321 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 ABHD14A-ACY1A0A1B0GW23 586 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 ASAP2O43150 1006 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 RPA1P27694 616 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 YWHABP31946 246 aaKnown RBP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 CCT6AP40227 531 aaKnown RBP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 UBA7P41226 1012 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 MRPS6P82932 125 aaKnown RBP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 NCBP1Q09161 790 aaKnown RBP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 XKR9Q5GH70 373 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 EFCAB12Q6NXP0 572 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 CNKSR3Q6P9H4 555 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 B3GNT9Q6UX72 402 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 FERMT3Q86UX7 667 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 CALML4Q96GE6 196 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 DYDC2Q96IM9 177 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 FTHL17Q9BXU8 183 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 FAM49AQ9H0Q0 323 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-231ENST00000512340 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 DNM3Q9UQ16 869 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 PCDHB6Q9Y5E3 794 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 TRPV2Q9Y5S1 764 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 SLC4A7Q9Y6M7 1214 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 ALPK3Q96L96 1907 aa8.34□□□□□ -1.07
NR1I3-231ENST00000512340 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 EML1O00423 815 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 GPR182O15218 404 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 EDIL3O43854 480 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 DGAT1O75907 488 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 LYPLA2O95372 231 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 AMHP03971 560 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ZSCAN22P10073 491 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 LONP1P36776 959 aaKnown RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ADAM17P78536 824 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ZNF200P98182 395 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ATP2C1P98194 919 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 CYP4A11Q02928 519 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 TFDP1Q14186 410 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 CTTNQ14247 550 aaKnown RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 MXD4Q14582 209 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 STK38Q15208 465 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 ZNF365Q70YC5 407 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 MCPH1Q8NEM0 835 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 SNX29Q8TEQ0 813 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 DNAJB3Q8WWF6 145 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 PSPC1Q8WXF1 523 aaKnown RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 HERVK_113Q902F9 699 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms