RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ECE2O60344 883 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FOSL2P15408 326 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 CNGA1P29973 690 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 HNRNPH2P55795 449 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 IRX1P78414 480 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 XKR9Q5GH70 373 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 NME8Q8N427 588 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 SH3GL1Q99961 368 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 STMN3Q9NZ72 180 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF229Q9UJW7 825 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 EVI5O60447 810 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SUN1O94901 812 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 KRT8P05787 483 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 STAT1P42224 750 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SLC9A5Q14940 896 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SBK1Q52WX2 424 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CAPRIN2Q6IMN6 1127 aaKnown RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 PEX26Q7Z412 305 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TROAPQ12815 778 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 MMEL1Q495T6 779 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CFAP221Q4G0U5 840 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 KCTD16Q68DU8 428 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF449Q6P9G9 518 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 ADGRF4Q8IZF3 695 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 PANX2Q96RD6 677 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 COQ7Q99807 217 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 AGXT2Q9BYV1 514 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 THAP9Q9H5L6 903 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 INTUQ9ULD6 942 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 IQCDQ96DY2 449 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 DACH2Q96NX9 599 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 NOP53Q9NZM5 478 aaKnown RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 TLK1Q9UKI8 766 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 EXOC7Q9UPT5 735 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 ESYT2A0FGR8 921 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 IFNAR2P48551 515 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC85BQ15834 202 aaPredicted RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 EXOC3L4Q17RC7 722 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SP8Q8IXZ3 490 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC127Q96BQ5 260 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 PHLPP2Q6ZVD8 1323 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 GNGT2O14610 69 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 AP5Z1O43299 807 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 NDUFA10O95299 355 aa11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CARSP49589 748 aaKnown RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC124Q96CT7 223 aaKnown RBP11.69□□□□□ -0.54
CPNE4-209ENST00000512055 SUPT3HO75486 399 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 RHOBTB1O94844 696 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 RASA1P20936 1047 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 STRN3Q13033 797 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 SNX1Q13596 522 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CAPN9O14815 690 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CHRNA5P30532 468 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 GRAMD1BQ3KR37 738 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC13Q8IYE1 715 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 VTI1AQ96AJ9 217 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 FUCA2Q9BTY2 467 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CHUKO15111 745 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 ZMYND10O75800 440 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CTTNQ14247 550 aaKnown RBP11.68□□□□□ -0.54
CPNE4-209ENST00000512055 TMTC4Q5T4D3 741 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CASC4Q6P4E1 433 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 KCNK3O14649 394 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 BCRP11274 1271 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 NT5C2P49902 561 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 DEUP1Q05D60 604 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 PTPAQ15257 358 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
CPNE4-209ENST00000512055 CYTH2Q99418 400 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms