RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 GINS2Q9Y248 185 aa15□□□□□ -0.01
RNF4-215ENST00000511843 TRPV2Q9Y5S1 764 aa15□□□□□ -0.01
RNF4-215ENST00000511843 COL1A2P08123 1366 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 TTC3P53804 2025 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 SMIM35A0A1B0GVV1 85 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 EML1O00423 815 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 EFCAB14O75071 495 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 C22orf31O95567 290 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 MMP1P03956 469 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
RNF4-215ENST00000511843 JAK3P52333 1124 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 PRKCEQ02156 737 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 ZNF484Q5JVG2 852 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 DIS3L2Q8IYB7 885 aaKnown RBP14.99□□□□□ -0.01
RNF4-215ENST00000511843 KIAA0319LQ8IZA0 1049 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
RNF4-215ENST00000511843 ARNTL2Q8WYA1 636 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 TNPO1Q92973 898 aaKnown RBP14.99□□□□□ -0.01
RNF4-215ENST00000511843 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 MTUS1Q9ULD2 1270 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 ATG2AQ2TAZ0 1938 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
RNF4-215ENST00000511843 M0QZ92 97 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 VTNP04004 478 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 OATP04181 439 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 SFNP31947 248 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 CLCN3P51790 818 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 CCDC85BQ15834 202 aaPredicted RBP14.98□□□□□ -0.01
RNF4-215ENST00000511843 TMEM266Q2M3C6 531 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 IER5Q5VY09 327 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 B3GNT9Q6UX72 402 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 TSHZ1Q6ZSZ6 1077 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 BANK1Q8NDB2 785 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 LINC01599Q8WXQ3 324 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 HAS1Q92839 578 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 APBB2Q92870 758 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 ZNF668Q96K58 619 aaPredicted RBP14.98□□□□□ -0.01
RNF4-215ENST00000511843 RAD9AQ99638 391 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 CELF4Q9BZC1 486 aaKnown RBP14.98□□□□□ -0.01
RNF4-215ENST00000511843 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 VAV3Q9UKW4 847 aa14.98□□□□□ -0.01
RNF4-215ENST00000511843 PRRC2BQ5JSZ5 2229 aaKnown RBP14.97□□□□□ -0.01
RNF4-215ENST00000511843 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 LINC01553A4QN01 128 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 CD2BP2O95400 341 aaKnown RBP14.97□□□□□ -0.01
RNF4-215ENST00000511843 TRIM29Q14134 588 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 PPP4R3AQ6IN85 833 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 MICALL1Q8N3F8 863 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 LRRC71Q8N4P6 559 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 KCNMB3Q9NPA1 279 aa14.97□□□□□ -0.01
RNF4-215ENST00000511843 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
RNF4-215ENST00000511843 GCFC2P16383 781 aaKnown RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 ATP2B1P20020 1258 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 HTRA4P83105 476 aaPredicted RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 KIZQ2M2Z5 673 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 MTERF2Q49AM1 385 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 FNDC1Q4ZHG4 1894 aaPredicted RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 NCAPH2Q6IBW4 605 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 GDPD5Q8WTR4 605 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 TMEM40Q8WWA1 233 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 FAM167AQ96KS9 214 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 ZSCAN31Q96LW9 406 aaPredicted RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 OSMRQ99650 979 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 PADI3Q9ULW8 664 aa14.96□□□□□ -0.01
RNF4-215ENST00000511843 NOC2LQ9Y3T9 749 aaKnown RBP14.96□□□□□ -0.01
RNF4-215ENST00000511843 A0A0C4DFX4 3053 aa14.96□□□□□ -0.02
RNF4-215ENST00000511843 ENPP3O14638 875 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 MARCH6O60337 910 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 STBD1O95210 358 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 PAK2Q13177 524 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 PPP2R5CQ13362 524 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 RABEP1Q15276 862 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 PLA2G4FQ68DD2 849 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 EFCAB12Q6NXP0 572 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
RNF4-215ENST00000511843 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.95□□□□□ -0.02
RNF4-215ENST00000511843 RDM1Q8NG50 284 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 C17orf80Q9BSJ5 609 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 TMX1Q9H3N1 280 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 SUGCTQ9HAC7 445 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 SH2B1Q9NRF2 756 aaPredicted RBP14.95□□□□□ -0.02
RNF4-215ENST00000511843 NRBP2Q9NSY0 501 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 WRAP73Q9P2S5 460 aaPredicted RBP14.95□□□□□ -0.02
RNF4-215ENST00000511843 INSL6Q9Y581 213 aa14.95□□□□□ -0.02
RNF4-215ENST00000511843 KDM3AQ9Y4C1 1321 aa14.94□□□□□ -0.02
RNF4-215ENST00000511843 DDX11L8A8MPP1 907 aa14.94□□□□□ -0.02
RNF4-215ENST00000511843 MGEA5O60502 916 aa14.94□□□□□ -0.02
RNF4-215ENST00000511843 RPLP2P05387 115 aaKnown RBP14.94□□□□□ -0.02
RNF4-215ENST00000511843 NFX1Q12986 1120 aaKnown RBP14.94□□□□□ -0.02
RNF4-215ENST00000511843 GRB10Q13322 594 aa14.94□□□□□ -0.02
RNF4-215ENST00000511843 DRP2Q13474 957 aa14.94□□□□□ -0.02
RNF4-215ENST00000511843 TARBP2Q15633 366 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms