RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 ME3Q16798 604 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 PRR16Q569H4 304 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
CLDND1-224ENST00000511667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLDND1-224ENST00000511667 TBCKQ8TEA7 893 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 APBB2Q92870 758 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 RAD9AQ99638 391 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 KIF2CQ99661 725 aa15.28■□□□□ 0.04
CLDND1-224ENST00000511667 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-224ENST00000511667 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-224ENST00000511667 TTC3P53804 2025 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 MYH9P35579 1960 aaKnown RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 LCHNA4D1U4 455 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 GRXCR2A6NFK2 248 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 HBP1O60381 514 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 PSMD10O75832 226 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 LARGE1O95461 756 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 CTSHP09668 335 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 KCNJ6P48051 423 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 ST3GAL1Q11201 340 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 LPIN1Q14693 890 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 C8orf34Q49A92 452 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 FBXO47Q5MNV8 452 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 FAM43BQ6ZT52 329 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 TMCO2Q7Z6W1 182 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 SEPT8Q92599 483 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 TNFRSF25Q93038 417 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 TOP1MTQ969P6 601 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 ZBTB10Q96DT7 871 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 PRRX2Q99811 253 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 SLKQ9H2G2 1235 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 RC3H2Q9HBD1 1191 aaKnown RBP15.27■□□□□ 0.04
CLDND1-224ENST00000511667 PCDHA10Q9Y5I2 948 aa15.27■□□□□ 0.04
CLDND1-224ENST00000511667 MRPS6P82932 125 aaKnown RBP15.26■□□□□ 0.03
CLDND1-224ENST00000511667 ZNF484Q5JVG2 852 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 SWSAP1Q6NVH7 229 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 NME8Q8N427 588 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 LINC01465Q8N7H1 131 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 GDPD5Q8WTR4 605 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 TRAPPC12Q8WVT3 735 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 DNAJB3Q8WWF6 145 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 FAM50BQ9Y247 325 aa15.26■□□□□ 0.03
CLDND1-224ENST00000511667 ZNF862O60290 1169 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 GFRA3O60609 400 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 STBD1O95210 358 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 ERVK-21P61565 698 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 PPP4R3AQ6IN85 833 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 KRT25Q7Z3Z0 450 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 RSPH3Q86UC2 560 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 KIAA0319LQ8IZA0 1049 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
CLDND1-224ENST00000511667 PRSS33Q8NF86 280 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 BBXQ8WY36 941 aaPredicted RBP15.25■□□□□ 0.03
CLDND1-224ENST00000511667 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
CLDND1-224ENST00000511667 AGO3Q9H9G7 860 aaKnown RBP15.25■□□□□ 0.03
CLDND1-224ENST00000511667 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 GJB4Q9NTQ9 266 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
CLDND1-224ENST00000511667 EVPLQ92817 2033 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 CACNA1HO95180 2353 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 LINC01553A4QN01 128 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 WDR64B1ANS9 1081 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 DDX39AO00148 427 aaKnown RBP15.24■□□□□ 0.03
CLDND1-224ENST00000511667 TDP2O95551 362 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 C22orf31O95567 290 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 PSAPP07602 524 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 LINC00271P0C7V0 271 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 KLRC1P26715 233 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 NEK4P51957 841 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 NONOQ15233 471 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLDND1-224ENST00000511667 PDXDC2PQ6P474 469 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 TSHZ1Q6ZSZ6 1077 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 OXER1Q8TDS5 423 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 TRPC6Q9Y210 931 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
CLDND1-224ENST00000511667 TRIOO75962 3097 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 AMHP03971 560 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 GHRP10912 638 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 SFNP31947 248 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 IGBP1P78318 339 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 TARBP2Q15633 366 aaKnown RBP15.23■□□□□ 0.03
CLDND1-224ENST00000511667 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CLDND1-224ENST00000511667 IER5Q5VY09 327 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
CLDND1-224ENST00000511667 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
CLDND1-224ENST00000511667 CELF4Q9BZC1 486 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms