RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 E2F7Q96AV8 911 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 SCYL1Q96KG9 808 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 CLUHP3Q96NS8 147 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 CDK5RAP1Q96SZ6 601 aaKnown RBP4.56□□□□□ -1.68
CHD1-207ENST00000511628 RBM15Q96T37 977 aaKnown RBP eCLIP4.56□□□□□ -1.68
CHD1-207ENST00000511628 FEZ1Q99689 392 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 BTBD2Q9BX70 525 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 SEC61A2Q9H9S3 476 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 CDC42EP3Q9UKI2 254 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 NR2E1Q9Y466 385 aa4.56□□□□□ -1.68
CHD1-207ENST00000511628 H7C1D1 291 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 ASLP04424 464 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 ZNF888P0CJ79 500 aaPredicted RBP4.55□□□□□ -1.68
CHD1-207ENST00000511628 ETV4P43268 484 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 IL13RA1P78552 427 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 MAP3K12Q12852 859 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 TCEA2Q15560 299 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 ZNF585AQ6P3V2 769 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 OVCH1Q7RTY7 1134 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 FILIP1Q7Z7B0 1213 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 NOSTRINQ8IVI9 506 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 ASB15Q8WXK1 588 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 PTPN18Q99952 460 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 OR10A5Q9H207 317 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 TRIM39Q9HCM9 518 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 SLC4A7Q9Y6M7 1214 aa4.55□□□□□ -1.68
CHD1-207ENST00000511628 A0A0G2JNJ9 132 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 KCNQ2O43526 872 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ZNF623O75123 536 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ZNF20P17024 532 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 MASP1P48740 699 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 KIF11P52732 1056 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 CD83Q01151 205 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 PABPC4Q13310 644 aaKnown RBP eCLIP4.54□□□□□ -1.68
CHD1-207ENST00000511628 TOP3AQ13472 1001 aaPredicted RBP4.54□□□□□ -1.68
CHD1-207ENST00000511628 CFAP100Q494V2 611 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 PIK3R6Q5UE93 754 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 GRAMD4Q6IC98 578 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ZCCHC8Q6NZY4 707 aaKnown RBP4.54□□□□□ -1.68
CHD1-207ENST00000511628 LRSAM1Q6UWE0 723 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 PALM2Q8IXS6 379 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
CHD1-207ENST00000511628 CHST14Q8NCH0 376 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 NEIL1Q96FI4 390 aaPredicted RBP4.54□□□□□ -1.68
CHD1-207ENST00000511628 WNK4Q96J92 1243 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 GNRHR2Q96P88 292 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ZDHHC5Q9C0B5 715 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 KATNBL1Q9H079 304 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 KLC2Q9H0B6 622 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 BTBD7Q9P203 1132 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 Q9UFV3 132 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 MYRFQ9Y2G1 1151 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ZKSCAN5Q9Y2L8 839 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 PTPN22Q9Y2R2 807 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 TNPO3Q9Y5L0 923 aaKnown RBP4.54□□□□□ -1.68
CHD1-207ENST00000511628 B3GALT1Q9Y5Z6 326 aa4.54□□□□□ -1.68
CHD1-207ENST00000511628 PTPDC1A2A3K4 754 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 GPR42O15529 346 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 CDC14BO60729 498 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 CLSTN1O94985 981 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 CNOT4O95628 575 aaKnown RBP4.53□□□□□ -1.68
CHD1-207ENST00000511628 JMJD7P0C870 316 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 SDSP20132 328 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 APEX1P27695 318 aaKnown RBP4.53□□□□□ -1.68
CHD1-207ENST00000511628 NEK4P51957 841 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 NFKB2Q00653 900 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 ROM1Q03395 351 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 MOGSQ13724 837 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 ICAM4Q14773 271 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 SEC23AQ15436 765 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 PTPROQ16827 1216 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 ABHD17CQ6PCB6 329 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 GGNQ86UU5 652 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 TAX1BP1Q86VP1 789 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 OR14A2Q96R54 314 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
CHD1-207ENST00000511628 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
CHD1-207ENST00000511628 PUF60Q9UHX1 559 aaKnown RBP4.53□□□□□ -1.68
CHD1-207ENST00000511628 GOLGA6L22H0YM25 854 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 MUSKO15146 869 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 ARHGAP6O43182 974 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 GLRX3O76003 335 aaKnown RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 CR2P20023 1033 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 SELENOPP49908 381 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 NOLC1Q14978 699 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHD1-207ENST00000511628 SART3Q15020 963 aaKnown RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 TM4SF20Q53R12 229 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 USP30Q70CQ3 517 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 SYNPOQ8N3V7 929 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 SH3RF3Q8TEJ3 882 aaPredicted RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 DLG3Q92796 817 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 NINJ1Q92982 152 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 AMNQ9BXJ7 453 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 KIAA1683Q9H0B3 1180 aa4.52□□□□□ -1.69
CHD1-207ENST00000511628 SLKQ9H2G2 1235 aaPredicted RBP4.52□□□□□ -1.69
CHD1-207ENST00000511628 MAGEC2Q9UBF1 373 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms