RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TBCCD1Q9NVR7 557 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 LIMA1Q9UHB6 759 aaKnown RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 TBC1D30Q9Y2I9 924 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MAP3K15Q6ZN16 1313 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 A6NJR5 290 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 GRM8O00222 908 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 O00370 1275 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 SH2B2O14492 632 aaPredicted RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 ZCCHC18P0CG32 403 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 ECHS1P30084 290 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MMP13P45452 471 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 CDK7P50613 346 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 PMS2P54278 862 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 RASSF7Q02833 373 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MTMR3Q13615 1198 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 INAQ16352 499 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MEA1Q16626 185 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 CCDC152Q4G0S7 254 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 EARS2Q5JPH6 523 aaKnown RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 CYB5R4Q7L1T6 521 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 TMC4Q7Z404 712 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 DDX42Q86XP3 938 aaKnown RBP eCLIP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MB21D2Q8IYB1 491 aaPredicted RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 RIBC1Q8N443 379 aaPredicted RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 LRRC8CQ8TDW0 803 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 ATP6V0A1Q93050 837 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 KRT12Q99456 494 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 PRMT1Q99873 361 aaKnown RBP7.92□□□□□ -1.14
CPNE4-208ENST00000511604 SELENOSQ9BQE4 189 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 ISCUQ9H1K1 167 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 NRDE2Q9H7Z3 1164 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 FBXL5Q9UKA1 691 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 CCDC61Q9Y6R9 512 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
CPNE4-208ENST00000511604 MYH2Q9UKX2 1941 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TPPPO94811 219 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 AFPP02771 609 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PABPC4LP0CB38 370 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 VDRP11473 427 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PTPREP23469 700 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 CYP4A11Q02928 519 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 DMPKQ09013 629 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 R3HDM1Q15032 1099 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TTF1Q15361 905 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SAFBQ15424 915 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 WASHC2DQ5SRD0 308 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SNX30Q5VWJ9 437 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 NEPROQ6NW34 567 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 C3orf62Q6ZUJ4 267 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 MARK2Q7KZI7 788 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 KBTBD3Q8NAB2 608 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TTC8Q8TAM2 541 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 DIS3LQ8TF46 1054 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PAGE5Q96GU1 130 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 DNAJC1Q96KC8 554 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 HAUS7Q99871 368 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 NEUROG2Q9H2A3 272 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 ADAM7Q9H2U9 754 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 RETREG1Q9H6L5 497 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PLSCR2Q9NRY7 297 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 FAM217BQ9NTX9 383 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 INTS9Q9NV88 658 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 DBF4Q9UBU7 674 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 BTBD19C9JJ37 291 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SPTLC1O15269 473 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 ENTPD5O75356 428 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 GJB6O95452 261 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 LMNAP02545 664 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 FGAP02671 866 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TCF7P36402 384 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 EMP3P54852 163 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TREML1Q86YW5 311 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 LSM14AQ8ND56 463 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 UHMK1Q8TAS1 419 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SHISA4Q96DD7 197 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 DUSP9Q99956 384 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SH3GL1Q99961 368 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 LRMDAQ9H2I8 198 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 SH2D4AQ9H788 454 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 NHEJ1Q9H9Q4 299 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 RNF14Q9UBS8 474 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 RASAL2Q9UJF2 1139 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 PACSIN2Q9UNF0 486 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 GDAQ9Y2T3 454 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 TDRKHQ9Y2W6 561 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 FAM32AQ9Y421 112 aaKnown RBP7.91□□□□□ -1.14
CPNE4-208ENST00000511604 FADS3Q9Y5Q0 445 aa7.91□□□□□ -1.14
CPNE4-208ENST00000511604 ITSN1Q15811 1721 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 KANSL1LA0AUZ9 987 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 KCNJ18B7U540 433 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 RAD51CO43502 376 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 ECE2O60344 883 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms