RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 BTBD7Q9P203 1132 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 NUDT5Q9UKK9 219 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 TMPRSS11EQ9UL52 423 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 PALD1Q9ULE6 856 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 NUMBLQ9Y6R0 609 aa7.02□□□□□ -1.29
HMGB1P47-201ENST00000511281 UBA6A0AVT1 1052 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 PRAMEF25A6NGN4 478 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 PRLP01236 227 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 HRGP04196 525 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 CYBBP04839 570 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 MMEP08473 750 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 POU2F2P09086 479 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 DBHP09172 617 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 FAHP16930 419 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 SLC5A3P53794 718 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 SRSF2Q01130 221 aaKnown RBP7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 OS9Q13438 667 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 CLUL1Q15846 466 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 UGT8Q16880 541 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 MUM1Q2TAK8 710 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 PITRM1Q5JRX3 1037 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 TTC38Q5R3I4 469 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 ZBTB41Q5SVQ8 909 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 PPP4R4Q6NUP7 873 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 CILP2Q8IUL8 1156 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 TGFBRAP1Q8WUH2 860 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 TIFAQ96CG3 184 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 MAN1C1Q9NR34 630 aa7.01□□□□□ -1.29
HMGB1P47-201ENST00000511281 OFD1O75665 1012 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 GDF11O95390 407 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 HK2P52789 917 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 ERVFRD-1P60508 538 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 SLC9A5Q14940 896 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 ACAP2Q15057 778 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 BRD3Q15059 726 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 PAN2Q504Q3 1202 aaKnown RBP7□□□□□ -1.29
HMGB1P47-201ENST00000511281 ARHGAP29Q52LW3 1261 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 TOR2AQ5JU69 321 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 IFIT1BQ5T764 474 aaKnown RBP7□□□□□ -1.29
HMGB1P47-201ENST00000511281 BICRALQ6AI39 1079 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 PAQR3Q6TCH7 311 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 NFXL1Q6ZNB6 911 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 C11orf96Q7Z7L8 435 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 DTX1Q86Y01 620 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 SLC41A1Q8IVJ1 513 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 HPS3Q969F9 1004 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 TUBD1Q9UJT1 453 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 WASF3Q9UPY6 502 aa7□□□□□ -1.29
HMGB1P47-201ENST00000511281 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 A0A1W2PQJ5 194 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 PRSS38A1L453 326 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 PSPNO60542 156 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 COBLO75128 1261 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 NDUFS2O75306 463 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 PRPF6O94906 941 aaKnown RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 PFKMP08237 780 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 SPINK2P20155 84 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 ARL4AP40617 200 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 ALDH6A1Q02252 535 aaKnown RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 DBPQ10586 325 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MORC3Q14149 939 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MYBPC3Q14896 1274 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 CT83Q5H943 113 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MBNL2Q5VZF2 373 aaKnown RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 TIGD7Q6NT04 549 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 LILRA6Q6PI73 481 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 ZNF574Q6ZN55 896 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MIB1Q86YT6 1006 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 LYSMD2Q8IV50 215 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MIER2Q8N344 545 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 PRR18Q8N4B5 295 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 ARRDC4Q8NCT1 418 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 AUTS2Q8WXX7 1259 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 EAF2Q96CJ1 260 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 TSPAN17Q96FV3 270 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 FAM193BQ96PV7 902 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 MPHOSPH6Q99547 160 aaKnown RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 ANO3Q9BYT9 981 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 RNF38Q9H0F5 515 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 POFUT1Q9H488 388 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 CCDC39Q9UFE4 941 aa6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 DDX20Q9UHI6 824 aaKnown RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 FRMPD2Q68DX3 1309 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P47-201ENST00000511281 KIAA1324LA8MWY0 1029 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 MAFO75444 373 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 LDHAP00338 332 aaKnown RBP6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 HTR3AP46098 478 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 USP14P54578 494 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 SAFBQ15424 915 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 TIGD5Q53EQ6 642 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 TMEM151AQ8N4L1 468 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 LRGUKQ96M69 825 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 MYL10Q9BUA6 226 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms