RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SPIRE1Q08AE8 756 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 CUL4AQ13619 759 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 IKBKEQ14164 716 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 LPIN1Q14693 890 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 MTERF2Q49AM1 385 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 PLEKHG4Q58EX7 1191 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 PLA2G4FQ68DD2 849 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 KIAA0319LQ8IZA0 1049 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 SEPT8Q92599 483 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 TTC12Q9H892 705 aaPredicted RBP15.7■□□□□ 0.1
DDX41-212ENST00000511040 WRAP73Q9P2S5 460 aaPredicted RBP15.7■□□□□ 0.1
DDX41-212ENST00000511040 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
DDX41-212ENST00000511040 PCDHA12Q9UN75 941 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 CEP131Q9UPN4 1083 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 TRPV2Q9Y5S1 764 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 EVPLQ92817 2033 aa15.7■□□□□ 0.1
DDX41-212ENST00000511040 SIP14410 1827 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 M0QZ92 97 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 BAIAP3O94812 1187 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
DDX41-212ENST00000511040 TOB1P50616 345 aaPredicted RBP15.69■□□□□ 0.1
DDX41-212ENST00000511040 CLCN3P51790 818 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 CYP4A11Q02928 519 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 CTTNQ14247 550 aaKnown RBP15.69■□□□□ 0.1
DDX41-212ENST00000511040 EPHA7Q15375 998 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 XKR3Q5GH77 459 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 ZNF697Q5TEC3 545 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 IER5Q5VY09 327 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
DDX41-212ENST00000511040 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDX41-212ENST00000511040 LRRC71Q8N4P6 559 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 TIFAQ96CG3 184 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 DYDC2Q96IM9 177 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
DDX41-212ENST00000511040 YBX2Q9Y2T7 364 aaKnown RBP15.69■□□□□ 0.1
DDX41-212ENST00000511040 GBF1Q92538 1859 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 ABHD14A-ACY1A0A1B0GW23 586 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 VTNP04004 478 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 FBXO47Q5MNV8 452 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 ANO5Q75V66 913 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 TPH2Q8IWU9 490 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 SLC9A7Q96T83 725 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 EIF2AK1Q9BQI3 630 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 LXNQ9BS40 222 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 CELF4Q9BZC1 486 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 AGO3Q9H9G7 860 aaKnown RBP15.68■□□□□ 0.1
DDX41-212ENST00000511040 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 CDHR5Q9HBB8 845 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 PCDHB6Q9Y5E3 794 aa15.68■□□□□ 0.1
DDX41-212ENST00000511040 POTEMA6NI47 508 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 ZBTB39O15060 712 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 MAGEB2O15479 319 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 TECP42680 631 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 NPEPPSP55786 919 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
DDX41-212ENST00000511040 TMEM266Q2M3C6 531 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 FAM117BQ6P1L5 589 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 NME8Q8N427 588 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
DDX41-212ENST00000511040 ZNF668Q96K58 619 aaPredicted RBP15.67■□□□□ 0.1
DDX41-212ENST00000511040 SEMA6BQ9H3T3 888 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
DDX41-212ENST00000511040 PTPRSQ13332 1948 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 A0A087WWV3 80 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
DDX41-212ENST00000511040 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
DDX41-212ENST00000511040 SLITRK3O94933 977 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 RPLP2P05387 115 aaKnown RBP15.66■□□□□ 0.1
DDX41-212ENST00000511040 CD52P31358 61 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 DRP2Q13474 957 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 RAB30Q15771 203 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 TSHZ1Q6ZSZ6 1077 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 PHOSPHO2Q8TCD6 241 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 BMP2KQ9NSY1 1161 aaPredicted RBP15.66■□□□□ 0.1
DDX41-212ENST00000511040 MTMR10Q9NXD2 777 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
DDX41-212ENST00000511040 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
DDX41-212ENST00000511040 AMHP03971 560 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 YWHABP31946 246 aaKnown RBP15.65■□□□□ 0.1
DDX41-212ENST00000511040 ORC2Q13416 577 aaPredicted RBP15.65■□□□□ 0.1
DDX41-212ENST00000511040 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
DDX41-212ENST00000511040 C4orf19Q8IY42 314 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 MYOCDQ8IZQ8 938 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 LINC01465Q8N7H1 131 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms