RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 EML1O00423 815 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 BACH1O14867 736 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 PARNO95453 639 aaKnown RBP17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 CHRNA1P02708 482 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 ATP2C1P98194 919 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 RAB30Q15771 203 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 SWSAP1Q6NVH7 229 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 DNAJB3Q8WWF6 145 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 EVPLQ92817 2033 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
SH3TC1-220ENST00000511002 WDR64B1ANS9 1081 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 BAIAP3O94812 1187 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 MGAT3Q09327 533 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 PLEKHG4Q58EX7 1191 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 FAM26DQ5JW98 314 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 PDXDC2PQ6P474 469 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 MIER3Q7Z3K6 550 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 HERC6Q8IVU3 1022 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 SLC9A7Q96T83 725 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 FAM49AQ9H0Q0 323 aaPredicted RBP17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 MSRAQ9UJ68 235 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 TCHHQ07283 1943 aa17.46■□□□□ 0.39
SH3TC1-220ENST00000511002 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 POTEMA6NI47 508 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 ZBTB42B2RXF5 422 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 CAND2O75155 1236 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 CA3P07451 260 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 JAK3P52333 1124 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 PTPAQ15257 358 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 IL17AQ16552 155 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 POTEBQ6S5H4 581 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 TRMT1LQ7Z2T5 733 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 TFIP11Q9UBB9 837 aaKnown RBP17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 PCDHA10Q9Y5I2 948 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 CDY2AQ9Y6F7 541 aa17.45■□□□□ 0.38
SH3TC1-220ENST00000511002 ABHD14A-ACY1A0A1B0GW23 586 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 LCHNA4D1U4 455 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 RRN3P2A6NIE6 340 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 LAD1O00515 517 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 ZNF862O60290 1169 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 PSAPP07602 524 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 GHRP10912 638 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 SFNP31947 248 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 PRPHP41219 470 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 TECP42680 631 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 KCNJ6P48051 423 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 NUCB2P80303 420 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 UGCGQ16739 394 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 ATP8B4Q8TF62 1192 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 MAFBQ9Y5Q3 323 aaPredicted RBP17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 IGSF9BQ9UPX0 1349 aa17.44■□□□□ 0.38
SH3TC1-220ENST00000511002 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 HBP1O60381 514 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 BMP15O95972 392 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 DNM1Q05193 864 aaKnown RBP17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 TMEM62Q0P6H9 643 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 IKBKEQ14164 716 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 LPIN1Q14693 890 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 FAM117BQ6P1L5 589 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 MTHFD1LQ6UB35 978 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 RDM1Q8NG50 284 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 SLC28A3Q9HAS3 691 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 CEP131Q9UPN4 1083 aa17.43■□□□□ 0.38
SH3TC1-220ENST00000511002 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 CHD7Q9P2D1 2997 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 EPOPA6NHQ4 379 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 FOSL2P15408 326 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 KLRC1P26715 233 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 SLC26A2P50443 739 aa17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 MRPS6P82932 125 aaKnown RBP17.42■□□□□ 0.38
SH3TC1-220ENST00000511002 TMEM266Q2M3C6 531 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms