RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 BRIP1Q9BX63 1249 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 TMEM60Q9H2L4 133 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 HSPA4LO95757 839 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 NR1H3Q13133 447 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 KLC3Q6P597 504 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 WDR75Q8IWA0 830 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 MORC4Q8TE76 937 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 CYTH2Q99418 400 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 KDM5CP41229 1560 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 RYBPQ8N488 228 aaPredicted RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 RBM41Q96IZ5 413 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 GJB4Q9NTQ9 266 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 PPARGC1AQ9UBK2 798 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 RASA4BC9J798 803 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 GYG2O15488 501 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 RASA4O43374 803 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 DEUP1Q05D60 604 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 ABI1Q8IZP0 508 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 FMR1NBQ8N0W7 255 aaPredicted RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 TRIML2Q8N7C3 387 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 HSPH1Q92598 858 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 TRIM15Q9C019 465 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 KLC2Q9H0B6 622 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 RPF1Q9H9Y2 349 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 ANAPC7Q9UJX3 599 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 CHEK2O96017 543 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 HOXA13P31271 388 aaPredicted RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 OCRLQ01968 901 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 FBXL13Q8NEE6 735 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 CHUKO15111 745 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 SERPINB2P05120 415 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 EEF1DP29692 281 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 CAV1Q03135 178 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 TRMT10CQ7L0Y3 403 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
NEK1-206ENST00000510533 DBNDD1Q9H9R9 158 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 ADAM22Q9P0K1 906 aa11.36□□□□□ -0.59
NEK1-206ENST00000510533 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 SFI1A8K8P3 1242 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 ANKRD65E5RJM6 399 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 K7ERI5 159 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 RFX1P22670 979 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 MCAMP43121 646 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 GPC5P78333 572 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 GFPT1Q06210 699 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 TAF1BQ53T94 588 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 KRT39Q6A163 491 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 UBN1Q9NPG3 1134 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 FAM8A1Q9UBU6 413 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 CTIFO43310 598 aaKnown RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
NEK1-206ENST00000510533 LDHAP00338 332 aaKnown RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 KRT10P13645 584 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PEX3P56589 373 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 ARL13BQ3SXY8 428 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 FAM47EQ6ZV65 393 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 SUDS3Q9H7L9 328 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 ZNF18P17022 549 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 CASP1P29466 404 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PRCPP42785 496 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 MAGOHP61326 146 aaKnown RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 TMED1Q13445 227 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 KIF22Q14807 665 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PFKFB3Q16875 520 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 CDO1Q16878 200 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 BEND6Q5SZJ8 279 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 EPM2AIP1Q7L775 607 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 VPS39Q96JC1 886 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 EIF2AQ9BY44 585 aaKnown RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 TTC37Q6PGP7 1564 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 H7C1W4 665 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 KRT38O76015 456 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 NR3C1P04150 777 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 OSBPP22059 807 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 PMS2P54278 862 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 LRRC23Q53EV4 343 aaPredicted RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 LCA5Q86VQ0 697 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 TBC1D10CQ8IV04 446 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 GSPT2Q8IYD1 628 aaKnown RBP11.35□□□□□ -0.59
NEK1-206ENST00000510533 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 HIPK4Q8NE63 616 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 TSC22D3Q99576 134 aa11.35□□□□□ -0.59
NEK1-206ENST00000510533 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
NEK1-206ENST00000510533 USP6P35125 1406 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms