RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 FCER1AP12319 257 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 TM4SF4P48230 202 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 TMEM119Q4V9L6 283 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 SHCBP1Q8NEM2 672 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 LARP4BQ92615 738 aaKnown RBP17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 PNMA5Q96PV4 448 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 RMDN3Q96TC7 470 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 NHEJ1Q9H9Q4 299 aaPredicted RBP17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 L1RE1Q9UN81 338 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 RBBP6Q7Z6E9 1792 aaKnown RBP17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 RPTORQ8N122 1335 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 SLC37A4O43826 429 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 CYP3A4P08684 503 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 ZNF76P36508 570 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 TXKP42681 527 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 RAD54LQ92698 747 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 PORCNQ9H237 461 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 AGPAT5Q9NUQ2 364 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 SAR1BQ9Y6B6 198 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 MYH7BA7E2Y1 1941 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 MYMKA6NI61 221 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 AOC2O75106 756 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 EIF2AK2P19525 551 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 CYP3A7P24462 503 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 VAV2P52735 878 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 MAN2A1Q16706 1144 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 FAM110CQ1W6H9 321 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 VWA3BQ502W6 1294 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 ARHGEF16Q5VV41 709 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 TXLNBQ8N3L3 684 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 PXMP2Q9NR77 195 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 PSD3Q9NYI0 1048 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 TRIM10Q9UDY6 481 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
SQSTM1-213ENST00000510187 TARSL2A2RTX5 802 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 POLR3GO15318 223 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 CIITAP33076 1130 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 VSNL1P62760 191 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 EHHADHQ08426 723 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 PRR16Q569H4 304 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 PCMTD1Q96MG8 357 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 MMP19Q99542 508 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 EDEM3Q9BZQ6 932 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 ACBD3Q9H3P7 528 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 ZFYVE28Q9HCC9 887 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 PLAGL2Q9UPG8 496 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 SIK3Q9Y2K2 1263 aa17.68■□□□□ 0.42
SQSTM1-213ENST00000510187 FRMPD4Q14CM0 1322 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 ADGRA2Q96PE1 1338 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 RHOXF2BP0C7M4 288 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 MCM6Q14566 821 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 KCTD2Q14681 263 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 NSUN6Q8TEA1 469 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 MBOAT7Q96N66 472 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 TSG101Q99816 390 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 RHOXF2Q9BQY4 288 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 NDST4Q9H3R1 872 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 ABCB6Q9NP58 842 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 CALCOCO1Q9P1Z2 691 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 TLR2O60603 784 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 LCA5LO95447 670 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 ATP1A1P05023 1023 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 PGM5Q15124 567 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 SPA17Q15506 151 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 Q4G0T1 1027 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 PCNX4Q63HM2 1172 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 NCAPH2Q6IBW4 605 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 IQCEQ6IPM2 695 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■□□□ 14.4
SQSTM1-213ENST00000510187 NOA1Q8NC60 698 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 IL31RAQ8NI17 732 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 CYP2W1Q8TAV3 490 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 EXOC4Q96A65 974 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 PDCD2LQ9BRP1 358 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 SLC39A2Q9NP94 309 aa17.67■□□□□ 0.42
SQSTM1-213ENST00000510187 KDM3AQ9Y4C1 1321 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 MARCH6O60337 910 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 USO1O60763 962 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 KLK7P49862 253 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 CRHR2Q13324 411 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 CEP55Q53EZ4 464 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 HYIQ5T013 277 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 ZFP91Q96JP5 570 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 CCDC42Q96M95 316 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 VIPAS39Q9H9C1 493 aa17.66■□□□□ 0.42
SQSTM1-213ENST00000510187 H3BQF6 201 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 PGK2P07205 417 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms