RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 A0A1W2PRX2 142 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 MSCO60682 206 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 ONECUT2O95948 504 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 CAPNS1P04632 268 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 GRK2P25098 689 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 GRK3P35626 688 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 ADCY8P40145 1251 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 SMAD3P84022 425 aaKnown RBP3.86□□□□□ -1.79
XRCC4-204ENST00000509268 FANCCQ00597 558 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 KIZQ2M2Z5 673 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 TMEM200BQ69YZ2 307 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 OTOP2Q7RTS6 562 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 RD3Q7Z3Z2 195 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 ZNF654Q8IZM8 581 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 NLGN4XQ8N0W4 816 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 CPLX3Q8WVH0 158 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 NELL1Q92832 810 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 LPPQ93052 612 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 BTBD2Q9BX70 525 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 INCENPQ9NQS7 918 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 TRPS1Q9UHF7 1281 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 CDC42EP3Q9UKI2 254 aa3.86□□□□□ -1.79
XRCC4-204ENST00000509268 KIAA0355O15063 1070 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 PTGS1P23219 599 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 BTBD8Q5XKL5 378 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 WDR48Q8TAF3 677 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 MLST8Q9BVC4 326 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 BCL2L13Q9BXK5 485 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 GPR87Q9BY21 358 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 KRTAP1-5Q9BYS1 174 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 GOLGA6L6A8MZA4 724 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 FAM20BO75063 409 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 KCNV1Q6PIU1 500 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 LBX2Q6XYB7 198 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 KCNJ15Q99712 375 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 ZFYVE21Q9BQ24 234 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 PHF20Q9BVI0 1012 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 HS3ST4Q9Y661 456 aa3.85□□□□□ -1.79
XRCC4-204ENST00000509268 CLK3P49761 638 aaKnown RBP3.84□□□□□ -1.8
XRCC4-204ENST00000509268 MAPK7Q13164 816 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 LRRC55Q6ZSA7 311 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 HTR3DQ70Z44 454 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 GPRASP2Q96D09 838 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 FAM184BQ9ULE4 1060 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 VWA7Q9Y334 891 aa3.84□□□□□ -1.8
XRCC4-204ENST00000509268 FAM47E-STBD1D6RA91 191 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 PTPN1P18031 435 aaKnown RBP3.83□□□□□ -1.8
XRCC4-204ENST00000509268 FAM169BQ8N8A8 192 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 GIPC2Q8TF65 315 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 DCAF4Q8WV16 495 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 C16orf92Q96LL3 132 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 CYP4F11Q9HBI6 524 aa3.83□□□□□ -1.8
XRCC4-204ENST00000509268 COL11A2P13942 1736 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 KLRG2A4D1S0 409 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 IKBKBO14920 756 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 SUSD5O60279 629 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 ECE1P42892 770 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 CD83Q01151 205 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 ELAVL1Q15717 326 aaKnown RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 KANK2Q63ZY3 851 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 FAM111BQ6SJ93 734 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 SH3RF2Q8TEC5 729 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 CD244Q9BZW8 370 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 RIC8BQ9NVN3 520 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 STRIP2Q9ULQ0 834 aa3.82□□□□□ -1.8
XRCC4-204ENST00000509268 CTDP1Q9Y5B0 961 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-204ENST00000509268 FAM90A27PA6NNH2 459 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 AOAHP28039 575 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 NASPP49321 788 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-204ENST00000509268 ADCY7P51828 1080 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 RABGGTBP53611 331 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 SESN2P58004 480 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-204ENST00000509268 HERVK_113P62684 666 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 MOGSQ13724 837 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 SAFB2Q14151 953 aaKnown RBP eCLIP3.81□□□□□ -1.8
XRCC4-204ENST00000509268 GRAMD4Q6IC98 578 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 FBXO42Q6P3S6 717 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 USP53Q70EK8 1073 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.81□□□□□ -1.8
XRCC4-204ENST00000509268 SEC16BQ96JE7 1060 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 MNTQ99583 582 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 EPN3Q9H201 632 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 SLC6A15Q9H2J7 730 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 R3HDMLQ9H3Y0 253 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 INSL6Q9Y581 213 aa3.81□□□□□ -1.8
XRCC4-204ENST00000509268 SOD2P04179 222 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 ELLP55199 621 aaPredicted RBP3.8□□□□□ -1.8
XRCC4-204ENST00000509268 GPR85P60893 370 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 TIGD2Q4W5G0 525 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 NBPF6Q5VWK0 638 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 NBPF4Q96M43 638 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 OR10A5Q9H207 317 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 BTBD7Q9P203 1132 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 SPATA31A6Q5VVP1 1343 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 AGRPO00253 132 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 DLX3O60479 287 aa3.8□□□□□ -1.8
XRCC4-204ENST00000509268 MFAP3LO75121 409 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms