RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ERVFC1P60507 584 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 RPS6P62753 249 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 ARHGAP1Q07960 439 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 SPEM2Q0P670 501 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 APOBRQ0VD83 1088 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 MTX1Q13505 466 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 ZNF528Q3MIS6 628 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 RCSD1Q6JBY9 416 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 CTR9Q6PD62 1173 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 UNQ6494/PRO21346Q6UXR6 183 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 CCDC149Q6ZUS6 474 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 NPAS4Q8IUM7 802 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 ARMC2Q8NEN0 867 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 PPTC7Q8NI37 304 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 ZNF689Q96CS4 500 aaPredicted RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 CEP95Q96GE4 821 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 SHDQ96IW2 340 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 SPATA33Q96N06 139 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 TCF25Q9BQ70 676 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNF4-211ENST00000509206 PRKRIP1Q9H875 184 aaPredicted RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 MLXIPQ9HAP2 919 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 KCNK12Q9HB15 430 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 PRDM9Q9NQV7 894 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 EVA1BQ9NVM1 165 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 MTMR4Q9NYA4 1195 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 IGSF9Q9P2J2 1179 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 ARPP21Q9UBL0 812 aaPredicted RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 CDH22Q9UJ99 828 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 DBNLQ9UJU6 430 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 NOB1Q9ULX3 412 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 SYNPO2Q9UMS6 1093 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 PCDHB7Q9Y5E2 793 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 MAFBQ9Y5Q3 323 aaPredicted RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.52□□□□□ -1.69
RNF4-211ENST00000509206 OTOGLQ3ZCN5 2332 aa4.52□□□□□ -1.69
RNF4-211ENST00000509206 FOCADQ5VW36 1801 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 TBKBP1A7MCY6 615 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 C1QTNF9BB2RNN3 333 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 H3BRB1 525 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 M0QZ92 97 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 HAS3O00219 553 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 NOP56O00567 594 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 NFIBO00712 420 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 FOXD2O60548 495 aaPredicted RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 PLA2G6O60733 806 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PRDM1O75626 825 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 APPP05067 770 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 C1QTNF9P0C862 333 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SMIM10L2AP0DMW4 78 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SMIM10L2BP0DMW5 78 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 ARP10275 920 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SCG2P13521 617 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PMLP29590 882 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 GBP2P32456 591 aaPredicted RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 RBM25P49756 843 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 MMP16P51512 607 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SHC2P98077 582 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 ARHGAP4P98171 946 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PTK2Q05397 1052 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 RING1Q06587 406 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 KCNH2Q12809 1159 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SMC1AQ14683 1233 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 PTPN14Q15678 1187 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 LPAL2Q16609 132 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 ALDH1L2Q3SY69 923 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 ARHGEF16Q5VV41 709 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PHLDB3Q6NSJ2 640 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 ZSCAN25Q6NSZ9 544 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PPP1R18Q6NYC8 613 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 CCDC62Q6P9F0 684 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 KCNV1Q6PIU1 500 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SLC30A10Q6XR72 485 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 PRR23BQ6ZRT6 265 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 AACSQ86V21 672 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 CABP7Q86V35 215 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 CRIPAKQ8N1N5 446 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 RASGRP4Q8TDF6 673 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 GPKOWQ92917 476 aaPredicted RBP eCLIP4.51□□□□□ -1.69
RNF4-211ENST00000509206 GMCL1Q96IK5 515 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 FTHL17Q9BXU8 183 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 RNPEPQ9H4A4 650 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 TUT1Q9H6E5 874 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 SETD4Q9NVD3 440 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 DZANK1Q9NVP4 752 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 TLR7Q9NYK1 1049 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 DDX41Q9UJV9 622 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
RNF4-211ENST00000509206 SETXQ7Z333 2677 aaKnown RBP4.51□□□□□ -1.69
RNF4-211ENST00000509206 RALGAPA2Q2PPJ7 1873 aa4.5□□□□□ -1.69
RNF4-211ENST00000509206 NLRC5Q86WI3 1866 aa4.5□□□□□ -1.69
RNF4-211ENST00000509206 PNMA6EA0A0J9YXQ4 647 aa4.5□□□□□ -1.69
RNF4-211ENST00000509206 KRBA1A5PL33 1030 aa4.5□□□□□ -1.69
RNF4-211ENST00000509206 TMEM8BA6NDV4 472 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms