RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PPP4R3AQ6IN85 833 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 NSUN7Q8NE18 718 aaKnown RBP21.02■□□□□ 0.96
UBE3D-207ENST00000509102 FAM20AQ96MK3 541 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 MBOAT7Q96N66 472 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 MAP7D2Q96T17 732 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 OSBPL7Q9BZF2 842 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 MYH9P35579 1960 aaKnown RBP21.02■□□□□ 0.96
UBE3D-207ENST00000509102 CHD7Q9P2D1 2997 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 PTPRSQ13332 1948 aa21.02■□□□□ 0.95
UBE3D-207ENST00000509102 KDM3AQ9Y4C1 1321 aa21.02■□□□□ 0.95
UBE3D-207ENST00000509102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-207ENST00000509102 LINC01553A4QN01 128 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 EDIL3O43854 480 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 LARGE1O95461 756 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 ATP4AP20648 1035 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 CD52P31358 61 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 PRKCEQ02156 737 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 CCDC85BQ15834 202 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-207ENST00000509102 ZNF710Q8N1W2 664 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 ETNPPLQ8TBG4 499 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 SAMD11Q96NU1 681 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
UBE3D-207ENST00000509102 MTUS1Q9ULD2 1270 aa21.01■□□□□ 0.95
UBE3D-207ENST00000509102 EYSQ5T1H1 3165 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 DKC1O60832 514 aaKnown RBP eCLIP21■□□□□ 0.95
UBE3D-207ENST00000509102 BAG4O95429 457 aaKnown RBP21■□□□□ 0.95
UBE3D-207ENST00000509102 C22orf31O95567 290 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 ERVK-21P61565 698 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 C8orf34Q49A92 452 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 KIAA0319LQ8IZA0 1049 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 GJB4Q9NTQ9 266 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 A0A0C4DFX4 3053 aa21■□□□□ 0.95
UBE3D-207ENST00000509102 ZBTB42B2RXF5 422 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 RFXAPO00287 272 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 DLL1O00548 723 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 TBX3O15119 743 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 ARHGEF15O94989 841 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 FDPSP14324 419 aaKnown RBP20.99■□□□□ 0.95
UBE3D-207ENST00000509102 POU3F3P20264 500 aaPredicted RBP20.99■□□□□ 0.95
UBE3D-207ENST00000509102 TBC1D8BQ0IIM8 1120 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 SAFBQ15424 915 aaKnown RBP eCLIP20.99■□□□□ 0.95
UBE3D-207ENST00000509102 OXER1Q8TDS5 423 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 GJA10Q969M2 543 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 ZSCAN31Q96LW9 406 aaPredicted RBP20.99■□□□□ 0.95
UBE3D-207ENST00000509102 AGO3Q9H9G7 860 aaKnown RBP20.99■□□□□ 0.95
UBE3D-207ENST00000509102 PADI3Q9ULW8 664 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 AKT3Q9Y243 479 aa20.99■□□□□ 0.95
UBE3D-207ENST00000509102 ENPP3O14638 875 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 GPR182O15218 404 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SLC37A4O43826 429 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 RPS6KA5O75582 802 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 MMP1P03956 469 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 NFX1Q12986 1120 aaKnown RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SKIV2LQ15477 1246 aaKnown RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 XKR3Q5GH77 459 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SLFN12Q8IYM2 578 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 FBXO22Q8NEZ5 403 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SP7Q8TDD2 431 aaPredicted RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 LLPHQ9BRT6 129 aaKnown RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SH2B1Q9NRF2 756 aaPredicted RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 THEGQ9P2T0 379 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 SEPT9Q9UHD8 586 aaPredicted RBP20.98■□□□□ 0.95
UBE3D-207ENST00000509102 MTCH2Q9Y6C9 303 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
UBE3D-207ENST00000509102 EPOPA6NHQ4 379 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 ZNF862O60290 1169 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 JAK2O60674 1132 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 DTNBO60941 627 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 STAG3L1P0CL83 205 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 CRYBB1P53674 252 aaPredicted RBP20.97■□□□□ 0.95
UBE3D-207ENST00000509102 NR5A1Q13285 461 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 GRB10Q13322 594 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 EFCAB12Q6NXP0 572 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 SCLT1Q96NL6 688 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 KCNMB3Q9NPA1 279 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 LMCD1Q9NZU5 365 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 SIP14410 1827 aa20.97■□□□□ 0.95
UBE3D-207ENST00000509102 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 DNM2P50570 870 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 FOSBP53539 338 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 PSMC5P62195 406 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 HMGN5P82970 282 aaKnown RBP20.96■□□□□ 0.95
UBE3D-207ENST00000509102 PPP2R5CQ13362 524 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 UGCGQ16739 394 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 KIZQ2M2Z5 673 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 KRT40Q6A162 431 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 CCDC83Q8IWF9 413 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 DIS3L2Q8IYB7 885 aaKnown RBP20.96■□□□□ 0.95
UBE3D-207ENST00000509102 FIBCD1Q8N539 461 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 IL27Q8NEV9 243 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 GDPD5Q8WTR4 605 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 SYMPKQ92797 1274 aaKnown RBP20.96■□□□□ 0.95
UBE3D-207ENST00000509102 SUGCTQ9HAC7 445 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 LRFN2Q9ULH4 789 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 RWDD3Q9Y3V2 267 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 PRUNE2Q8WUY3 3088 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 TRANK1O15050 2925 aa20.96■□□□□ 0.95
UBE3D-207ENST00000509102 VTNP04004 478 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 CLCN3P51790 818 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 CDC42EP1Q00587 391 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms