RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 TMEM266Q2M3C6 531 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 CKAP2LQ8IYA6 745 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 UPF3BQ9BZI7 483 aaKnown RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 ERVK-5Q9HDB9 667 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 GABBR1Q9UBS5 961 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 GINS2Q9Y248 185 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 RWDD3Q9Y3V2 267 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 ADGRA3Q8IWK6 1321 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 COL4A4P53420 1690 aaPredicted RBP14.15□□□□□ -0.14
PDPN-208ENST00000509009 RPS6KA5O75582 802 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 C22orf31O95567 290 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 KCNA5P22460 613 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 TIGD5Q53EQ6 642 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 TCEAL5Q5H9L2 206 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 TMEM40Q8WWA1 233 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 RIT2Q99578 217 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
PDPN-208ENST00000509009 DISC1Q9NRI5 854 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 ST3GAL5Q9UNP4 418 aa14.15□□□□□ -0.14
PDPN-208ENST00000509009 COL4A6Q14031 1691 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 M0R2N6 131 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 CPLX1O14810 134 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 ZNF862O60290 1169 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 MGEA5O60502 916 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 GPR32O75388 356 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 DEXIO95424 95 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 CRYBB1P53674 252 aaPredicted RBP14.14□□□□□ -0.15
PDPN-208ENST00000509009 COL19A1Q14993 1142 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 KIZQ2M2Z5 673 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 CMTR2Q8IYT2 770 aaKnown RBP14.14□□□□□ -0.15
PDPN-208ENST00000509009 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 METTL13Q8N6R0 699 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 NEK9Q8TD19 979 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 TBCKQ8TEA7 893 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 AIFM3Q96NN9 605 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 ADAM2Q99965 735 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 LMAN2LQ9H0V9 348 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
PDPN-208ENST00000509009 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
PDPN-208ENST00000509009 MRPL42Q9Y6G3 142 aaKnown RBP14.14□□□□□ -0.15
PDPN-208ENST00000509009 CYP3A7-CYP3A51PA0A087WV96 503 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 WDR64B1ANS9 1081 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 GPR182O15218 404 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 MAGEB2O15479 319 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 GAS7O60861 476 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 VTNP04004 478 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 CYP3A7P24462 503 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 SARSP49591 514 aaKnown RBP14.13□□□□□ -0.15
PDPN-208ENST00000509009 GATMP50440 423 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 FAM189BP81408 668 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 STK3Q13188 491 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 NPY5RQ15761 445 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 Q4G0T1 1027 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 ODR4Q5SWX8 454 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 EFCAB12Q6NXP0 572 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 LINC01465Q8N7H1 131 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 GJA10Q969M2 543 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 PABPC5Q96DU9 382 aaKnown RBP14.13□□□□□ -0.15
PDPN-208ENST00000509009 FAM167AQ96KS9 214 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
PDPN-208ENST00000509009 CD320Q9NPF0 282 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 RGS18Q9NS28 235 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 CEP131Q9UPN4 1083 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 PCDHB7Q9Y5E2 793 aa14.13□□□□□ -0.15
PDPN-208ENST00000509009 GRXCR2A6NFK2 248 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 C9IYK1 514 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 H3BQ06 376 aaPredicted RBP14.12□□□□□ -0.15
PDPN-208ENST00000509009 NCK2O43639 380 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 PSMD10O75832 226 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 SFNP31947 248 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 CAMK1Q14012 370 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 PAN2Q504Q3 1202 aaKnown RBP14.12□□□□□ -0.15
PDPN-208ENST00000509009 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 LRCH2Q5VUJ6 765 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 PTCRAQ6ISU1 281 aaPredicted RBP14.12□□□□□ -0.15
PDPN-208ENST00000509009 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
PDPN-208ENST00000509009 SLC24A5Q71RS6 500 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 FAM178BQ8IXR5 827 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
PDPN-208ENST00000509009 DAGLBQ8NCG7 672 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms