RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 PCDHA2Q9Y5H9 948 aa9.5□□□□□ -0.89
ARRDC3-205ENST00000508948 COL1A2P08123 1366 aa9.5□□□□□ -0.89
ARRDC3-205ENST00000508948 RSPH10B2B2RC85 870 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CHRNA1P02708 482 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 RSPH10BP0C881 870 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CLCN3P51790 818 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 ATP2C1P98194 919 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CEBPZQ03701 1054 aaKnown RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 DRP2Q13474 957 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 PTPAQ15257 358 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CATSPER3Q86XQ3 398 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 C4orf19Q8IY42 314 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 KIAA0319LQ8IZA0 1049 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 LRRC71Q8N4P6 559 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 LINC01465Q8N7H1 131 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 ZNF668Q96K58 619 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 USP28Q96RU2 1077 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 ZDHHC9Q9Y397 364 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 CDY2AQ9Y6F7 541 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 TANC1Q9C0D5 1861 aa9.49□□□□□ -0.89
ARRDC3-205ENST00000508948 SIP14410 1827 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 SMIM35A0A1B0GVV1 85 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 VWA3AA6NCI4 1184 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 F13A1P00488 732 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 FGBP02675 491 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 VTNP04004 478 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 YWHABP31946 246 aaKnown RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 PRPHP41219 470 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 MRPS6P82932 125 aaKnown RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 TMEM266Q2M3C6 531 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 FAM26DQ5JW98 314 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 EFCAB12Q6NXP0 572 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 DTHD1Q6ZMT9 781 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 OTOP2Q7RTS6 562 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 RPAINQ86UA6 219 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 METTL13Q8N6R0 699 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 PIGOQ8TEQ8 1089 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 MMTAG2Q9BU76 263 aaKnown RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 POLR3CQ9BUI4 534 aaPredicted RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 ZSCAN16Q9H4T2 348 aaPredicted RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 SUGCTQ9HAC7 445 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 CXXC1Q9P0U4 656 aaPredicted RBP9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 LRWD1Q9UFC0 647 aa9.48□□□□□ -0.89
ARRDC3-205ENST00000508948 LAD1O00515 517 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 LYPLA2O95372 231 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 CXCL10P02778 98 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 GHRP10912 638 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 MARCKSP29966 332 aaPredicted RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 RFC2P35250 354 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 CCT6AP40227 531 aaKnown RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 TBC1D8BQ0IIM8 1120 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 BECN1Q14457 450 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 PDIA5Q14554 519 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 FAM109BQ6ICB4 259 aaPredicted RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 NEK9Q8TD19 979 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 CEP170P1Q96L14 293 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 PNMA5Q96PV4 448 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 PLIN2Q99541 437 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 CYP26B1Q9NR63 512 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 CEP131Q9UPN4 1083 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 TRPV2Q9Y5S1 764 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 EVPLQ92817 2033 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 TET1Q8NFU7 2136 aa9.47□□□□□ -0.89
ARRDC3-205ENST00000508948 IGKV6-21A0A0C4DH24 114 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 E9PMD0 336 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 MAGEB2O15479 319 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 DKC1O60832 514 aaKnown RBP eCLIP9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 CAND2O75155 1236 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 GPR32O75388 356 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 BRD1O95696 1058 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 RPA1P27694 616 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 LPIN1Q14693 890 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 ZRSR1Q15695 479 aaKnown RBP9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 KIZQ2M2Z5 673 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 SPECC1Q5M775 1068 aa9.46□□□□□ -0.9
ARRDC3-205ENST00000508948 FBXO47Q5MNV8 452 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms