RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LY75O60449 1722 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 B4E1Z4 1266 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PRODHO43272 600 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 MAN1A2O60476 641 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 BRAFP15056 766 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 IGFBP4P22692 258 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CA8P35219 290 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 IARSP41252 1262 aaKnown RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 FMR1Q06787 632 aaKnown RBP eCLIP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 RASA2Q15283 850 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 ZKSCAN8Q15776 578 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PAN2Q504Q3 1202 aaKnown RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 KRT39Q6A163 491 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 KIAA1958Q8N8K9 716 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PPP1R9BQ96SB3 815 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 SPATA9Q9BWV2 254 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 ABCG4Q9H172 646 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 EPC1Q9H2F5 836 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CAMK2AQ9UQM7 478 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 V9GYY5 206 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 H3BUI4 141 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 POLR2BP30876 1174 aaKnown RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 AKT1P31749 480 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 GBP1P32455 592 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 MTMR1Q13613 665 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CBX2Q14781 532 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 NCAPHQ15003 741 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CXorf57Q6NSI4 855 aaKnown RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PMF1Q6P1K2 205 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 LLGL2Q6P1M3 1020 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 USP53Q70EK8 1073 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 ESX1Q8N693 406 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC63Q8NA47 563 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 ERCC4Q92889 916 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PHKBQ93100 1093 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 FAM210AQ96ND0 272 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 TAF1DQ9H5J8 278 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF395Q9H8N7 513 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 RAD18Q9NS91 495 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 BMP2KQ9NSY1 1161 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-209ENST00000508871 SLAIN2Q9P270 581 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 PMF1-BGLAPU3KQ54 211 aa4.28□□□□□ -1.72
NEDD4-209ENST00000508871 MYH3P11055 1940 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KCNH1O95259 989 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CCNYL3P0C7X3 344 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 AKR1B1P15121 316 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SLC16A1P53985 500 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PER3P56645 1201 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 RALGDSQ12967 914 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PPP1R7Q15435 360 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KYNUQ16719 465 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SLC44A4Q53GD3 710 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 BMP2KLQ5H9B9 411 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 BTNL9Q6UXG8 535 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 ENOSF1Q7L5Y1 443 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 OR6J1Q8NGC5 347 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SETD6Q8TBK2 473 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KCNG4Q8TDN1 519 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 VPS39Q96JC1 886 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SRCIN1Q9C0H9 1055 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 C1orf112Q9NSG2 853 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 POMT1Q9Y6A1 747 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 DDX60Q8IY21 1712 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 AOX1Q06278 1338 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 ADAMTS2O95450 1211 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 HNF4AP41235 474 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CPA2P48052 419 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CACNB3P54284 484 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 OLR1P78380 273 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 MORC3Q14149 939 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 RBM20Q5T481 1227 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 TDRD10Q5VZ19 366 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 PLD6Q8N2A8 252 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CRACR2BQ8N4Y2 399 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SMCR8Q8TEV9 937 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 FGD4Q96M96 766 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 USB1Q9BQ65 265 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 CARD10Q9BWT7 1032 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 IQCGQ9H095 443 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 ALG13Q9NP73 1137 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 SRP68Q9UHB9 627 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 FBXO10Q9UK96 956 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 USP20Q9Y2K6 914 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 BCL9O00512 1426 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 COL24A1Q17RW2 1714 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 POM121BA6NF01 834 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 TGDSO95455 350 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 NUDT7P0C024 238 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 MYL4P12829 197 aa4.27□□□□□ -1.73
NEDD4-209ENST00000508871 TRIM21P19474 475 aaKnown RBP4.27□□□□□ -1.73
NEDD4-209ENST00000508871 LONP1P36776 959 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms