RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 THBS2P35442 1172 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 CASP7P55210 303 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 EIF6P56537 245 aaKnown RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 PICALMQ13492 652 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 PPP2R5EQ16537 467 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 ARMC3Q5W041 872 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 BORAQ6PGQ7 559 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 PASD1Q8IV76 773 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 TXNDC5Q8NBS9 432 aaKnown RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 VPS37AQ8NEZ2 397 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 PLEKHO2Q8TD55 490 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 IPO4Q8TEX9 1081 aaKnown RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 JPH3Q8WXH2 748 aaPredicted RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 SKA1Q96BD8 255 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 CAMKK2Q96RR4 588 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 C1QTNF3Q9BXJ4 246 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 RHOBTB2Q9BYZ6 727 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 AP5M1Q9H0R1 490 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 PHAXQ9H814 394 aaKnown RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 EVLQ9UI08 416 aaPredicted RBP5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 AKT3Q9Y243 479 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 RABGAP1Q9Y3P9 1069 aa5.22□□□□□ -1.57
SMARCA5-202ENST00000508573 A0A1W2PQH9 124 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 C1QTNF3-AMACRE9PGA6 284 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 APAF1O14727 1248 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 SGSM2O43147 1006 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 SUV39H1O43463 412 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 RFPL1O75677 317 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 ABLIM3O94929 683 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 GJB6O95452 261 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 FAM153BP0C7A2 387 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 PLS3P13797 630 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 GIPRP48546 466 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 SSRP1Q08945 709 aaKnown RBP5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 PABPC4Q13310 644 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 TCIRG1Q13488 830 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 C16orf54Q6UWD8 224 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 MMS22LQ6ZRQ5 1243 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 TOGARAM2Q6ZUX3 1019 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 ANKRD23Q86SG2 305 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 ZNF354CQ86Y25 554 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 TTLL6Q8N841 843 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 SH3RF3Q8TEJ3 882 aaPredicted RBP5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 DPF3Q92784 378 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 CHMP4CQ96CF2 233 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 MTMR8Q96EF0 704 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 RCC1LQ96I51 464 aaKnown RBP5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 TRIM8Q9BZR9 551 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 SLC5A4Q9NY91 659 aa5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 FBXO2Q9UK22 296 aaPredicted RBP5.21□□□□□ -1.58
SMARCA5-202ENST00000508573 C22orf46C9J442 243 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 KCNH1O95259 989 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ZSCAN20P17040 1043 aaPredicted RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 TYRP1P17643 537 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ITKQ08881 620 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 GRB10Q13322 594 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 PUM3Q15397 648 aaKnown RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 FAM26FQ5R3K3 315 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 PPP4R3AQ6IN85 833 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 KIAA1211LQ6NV74 962 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 SPRED1Q7Z699 444 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 MILR1Q7Z6M3 343 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ZBTB46Q86UZ6 589 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ZC3H18Q86VM9 953 aaKnown RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ZSCAN30Q86W11 494 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 DCP2Q8IU60 420 aaKnown RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ZSWIM2Q8NEG5 633 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 DVL3Q92997 716 aaPredicted RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 SERINC2Q96SA4 455 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ELAC2Q9BQ52 826 aaKnown RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 SSBP3Q9BWW4 388 aaPredicted RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 RETREG1Q9H6L5 497 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 PLCB1Q9NQ66 1216 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 SAGE1Q9NXZ1 904 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 MAPRE3Q9UPY8 281 aa5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 MORC2Q9Y6X9 1032 aaPredicted RBP5.2□□□□□ -1.58
SMARCA5-202ENST00000508573 ANO9A1A5B4 782 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 TTC36A6NLP5 189 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 RFPL3O75679 317 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 RHOBTB3O94955 611 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 FAM200BP0CF97 657 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 SCP2P22307 547 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 STAT5AP42229 794 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 ZNF280AP59817 542 aaPredicted RBP5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 SCRN1Q12765 414 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 CNGB1Q14028 1251 aaPredicted RBP5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 FXNQ16595 210 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 LARP1BQ659C4 914 aaKnown RBP5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 MBLAC2Q68D91 279 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 CFAP161Q6P656 301 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 CASC1Q6TDU7 716 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 DDX46Q7L014 1031 aaKnown RBP5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 NECAB2Q7Z6G3 386 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 SKAP1Q86WV1 359 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 IFNL2Q8IZJ0 200 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 KLHL6Q8WZ60 621 aa5.19□□□□□ -1.58
SMARCA5-202ENST00000508573 LCORQ96JN0 433 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms