RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PABPC4Q13310 644 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■■■□ 24.1
UBE2D3-225ENST00000508476 TBR1Q16650 682 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 IFNL2Q8IZJ0 200 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 CHST14Q8NCH0 376 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 DNERQ8NFT8 737 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
UBE2D3-225ENST00000508476 GOLGA6L22H0YM25 854 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 HMGCRP04035 888 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 JMJD7P0C870 316 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 MOGSQ13724 837 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 CXXC5Q7LFL8 322 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 RTN4RL1Q86UN2 441 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 LMF1Q96S06 567 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 GPR20Q99678 358 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 ASB1Q9Y576 335 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 CD2APQ9Y5K6 639 aa6.91□□□□□ -1.3
UBE2D3-225ENST00000508476 B4E1Z4 1266 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 KIF11P52732 1056 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 CDSNQ15517 529 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 ZNF585AQ6P3V2 769 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 C1QTNF3Q9BXJ4 246 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 SEC61A2Q9H9S3 476 aa6.9□□□□□ -1.3
UBE2D3-225ENST00000508476 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 FOXS1O43638 330 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 STAT5BP51692 787 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 PUM1Q14671 1186 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 CDCA2Q69YH5 1023 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
UBE2D3-225ENST00000508476 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 CBX4O00257 560 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 MATN2O00339 956 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 RFPL3O75679 317 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 ARHGAP44Q17R89 818 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 WDR48Q8TAF3 677 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 Q8TCH9 128 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 FANCLQ9NW38 375 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 Q9UFV3 132 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
UBE2D3-225ENST00000508476 FAM83GA6ND36 823 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 ZNF623O75123 536 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 RGS3P49796 1198 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 RAC3P60763 192 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 ZNF568Q3ZCX4 644 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 ZMAT1Q5H9K5 638 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 CREB3L3Q68CJ9 461 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 TRIM68Q6AZZ1 485 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 JAZF1Q86VZ6 243 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 PALM2Q8IXS6 379 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 BCL6BQ8N143 479 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 GIMAP8Q8ND71 665 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 KLC2Q9H0B6 622 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 CABP5Q9NP86 173 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 B4GALT6Q9UBX8 382 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 MAGEL2Q9UJ55 1249 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 NR2E1Q9Y466 385 aa6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-225ENST00000508476 SLC9A1P19634 815 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 APEX1P27695 318 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 MRE11P49959 708 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 SLC6A3Q01959 620 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 AGBL4Q5VU57 503 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 KIAA1958Q8N8K9 716 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 CFHR4Q92496 578 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 OAZ3Q9UMX2 235 aa6.86□□□□□ -1.31
UBE2D3-225ENST00000508476 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 KPNA6O60684 536 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 PRLP01236 227 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 FNTBP49356 437 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 TCEA2Q15560 299 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 SPRED1Q7Z699 444 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 RTKN2Q8IZC4 609 aa6.85□□□□□ -1.31
UBE2D3-225ENST00000508476 FUKQ8N0W3 1084 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms