RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 NIFKQ9BYG3 293 aaKnown RBP16.93■□□□□ 0.3
TRIO-211ENST00000508343 IFIH1Q9BYX4 1025 aaKnown RBP16.93■□□□□ 0.3
TRIO-211ENST00000508343 CELF4Q9BZC1 486 aaKnown RBP16.93■□□□□ 0.3
TRIO-211ENST00000508343 ZNF576Q9H609 170 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 PCDHA12Q9UN75 941 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 YBX2Q9Y2T7 364 aaKnown RBP16.93■□□□□ 0.3
TRIO-211ENST00000508343 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.93■□□□□ 0.3
TRIO-211ENST00000508343 TRPV2Q9Y5S1 764 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 SQORQ9Y6N5 450 aa16.93■□□□□ 0.3
TRIO-211ENST00000508343 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRIO-211ENST00000508343 STBD1O95210 358 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
TRIO-211ENST00000508343 GHRP10912 638 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRIO-211ENST00000508343 GJB2P29033 226 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
TRIO-211ENST00000508343 DEFB103AP81534 67 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 SPIRE1Q08AE8 756 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
TRIO-211ENST00000508343 METTL13Q8N6R0 699 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 USP38Q8NB14 1042 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 BANK1Q8NDB2 785 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 GUCD1Q96NT3 240 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 MTMR9Q96QG7 549 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 NKX2-4Q9H2Z4 354 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
TRIO-211ENST00000508343 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 AMHP03971 560 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 MYOGP15173 224 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 TMOD1P28289 359 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 MCM7P33993 719 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 TXKP42681 527 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 ORC2Q13416 577 aaPredicted RBP16.91■□□□□ 0.3
TRIO-211ENST00000508343 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
TRIO-211ENST00000508343 NCAPH2Q6IBW4 605 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 EFCAB12Q6NXP0 572 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIO-211ENST00000508343 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 TTC12Q9H892 705 aaPredicted RBP16.91■□□□□ 0.3
TRIO-211ENST00000508343 WDR81Q562E7 1941 aa16.91■□□□□ 0.3
TRIO-211ENST00000508343 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
TRIO-211ENST00000508343 ZNF174Q15697 407 aa16.9■□□□□ 0.3
TRIO-211ENST00000508343 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
TRIO-211ENST00000508343 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
TRIO-211ENST00000508343 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
TRIO-211ENST00000508343 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
TRIO-211ENST00000508343 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
TRIO-211ENST00000508343 TLL1O43897 1013 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 GJB5O95377 273 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 CD52P31358 61 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 CUL4AQ13619 759 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 GRIN2CQ14957 1233 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 ANO5Q75V66 913 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.29
TRIO-211ENST00000508343 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 LINC01465Q8N7H1 131 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 DYDC2Q96IM9 177 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 CEP89Q96ST8 783 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 RAD9AQ99638 391 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 ZSWIM4Q9H7M6 989 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 SUGCTQ9HAC7 445 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 RGL1Q9NZL6 768 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 GINS2Q9Y248 185 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 STXBP5LQ9Y2K9 1186 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 EVPLQ92817 2033 aa16.89■□□□□ 0.29
TRIO-211ENST00000508343 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.88■□□□□ 0.29
TRIO-211ENST00000508343 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 H3BQV1 296 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 SLITRK3O94933 977 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 VTNP04004 478 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 CA3P07451 260 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 CLCN3P51790 818 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 CRYBB1P53674 252 aaPredicted RBP16.88■□□□□ 0.29
TRIO-211ENST00000508343 KIZQ2M2Z5 673 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
TRIO-211ENST00000508343 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 TOP1MTQ969P6 601 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 HSD17B14Q9BPX1 270 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 EIF2AK1Q9BQI3 630 aaKnown RBP16.88■□□□□ 0.29
TRIO-211ENST00000508343 LXNQ9BS40 222 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 WRAP73Q9P2S5 460 aaPredicted RBP16.88■□□□□ 0.29
TRIO-211ENST00000508343 PADI3Q9ULW8 664 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
TRIO-211ENST00000508343 IGKV6-21A0A0C4DH24 114 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms