RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 UIMC1Q96RL1 719 aa7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 FAM49AQ9H0Q0 323 aaPredicted RBP7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 TMX1Q9H3N1 280 aa7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 RBM28Q9NW13 759 aaKnown RBP7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 PCDHA2Q9Y5H9 948 aa7.35□□□□□ -1.23
HMGN1P16-201ENST00000508308 ADGRA3Q8IWK6 1321 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 IGSF9BQ9UPX0 1349 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 PI4K2BG5E9Z4 385 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 MGEA5O60502 916 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 FOSP01100 380 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 CYP3A4P08684 503 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 GATMP50440 423 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 STAT5BP51692 787 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 ADCY7P51828 1080 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 DLX2Q07687 328 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 HYAL1Q12794 435 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 NTRK3Q16288 839 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 JAKMIP3Q5VZ66 844 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 PTCRAQ6ISU1 281 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 MTHFD1LQ6UB35 978 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 CENPQQ7L2Z9 268 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 RSPH3Q86UC2 560 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 CCDC60Q8IWA6 550 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 KIAA0319LQ8IZA0 1049 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 FIBCD1Q8N539 461 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 PABPC5Q96DU9 382 aaKnown RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 C1QTNF1Q9BXJ1 281 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 CELF4Q9BZC1 486 aaKnown RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 PADI3Q9ULW8 664 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 SQORQ9Y6N5 450 aa7.34□□□□□ -1.23
HMGN1P16-201ENST00000508308 NID2Q14112 1375 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 MYH9P35579 1960 aaKnown RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 KDM3AQ9Y4C1 1321 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 FNDC1Q4ZHG4 1894 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 PLXNA4Q9HCM2 1894 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 SMIM35A0A1B0GVV1 85 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 FAM86C2PA6NEL3 165 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 GOLGA8AA7E2F4 631 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 GOLGA8BA8MQT2 603 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 hCG_1984214I3L0E3 225 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 DDX39AO00148 427 aaKnown RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 LINC01565O15544 149 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 CDC45O75419 566 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 RB1P06400 928 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 KLRC1P26715 233 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 CTNNB1P35222 781 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 RCAN1P53805 252 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 AP3B2Q13367 1082 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 PTPROQ16827 1216 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 TMEM266Q2M3C6 531 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 IER5Q5VY09 327 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 SYNE3Q6ZMZ3 975 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 NIPA1Q7RTP0 329 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 GJD3Q8N144 294 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 FBXL16Q8N461 479 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 ZNF713Q8N859 430 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 ATP8B4Q8TF62 1192 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 LENG9Q96B70 501 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 SDF4Q9BRK5 362 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 AGXT2Q9BYV1 514 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 ZMYND12Q9H0C1 365 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 NSUN3Q9H649 340 aaKnown RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 AZI2Q9H6S1 392 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 PLAGL2Q9UPG8 496 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 NOC2LQ9Y3T9 749 aaKnown RBP7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 TRPV2Q9Y5S1 764 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 SNX14Q9Y5W7 946 aa7.33□□□□□ -1.24
HMGN1P16-201ENST00000508308 ESYT2A0FGR8 921 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 IPO5O00410 1097 aaKnown RBP7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 PRPF3O43395 683 aaKnown RBP7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 GPR37L1O60883 481 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 TBX10O75333 385 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 C22orf31O95567 290 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 MMP1P03956 469 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 ITGB1P05556 798 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 SCG2P13521 617 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 HSPA4P34932 840 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 IRS1P35568 1242 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 PLA2G5P39877 138 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 SLC26A2P50443 739 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 EVCP57679 992 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 KRT76Q01546 638 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 ZP2Q05996 745 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 ADAM15Q13444 863 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 BTG3Q14201 252 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 KRT32Q14532 448 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 TMEM31Q5JXX7 168 aa7.32□□□□□ -1.24
HMGN1P16-201ENST00000508308 SWSAP1Q6NVH7 229 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms