RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 OTOP2Q7RTS6 562 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 PTRH1Q86Y79 214 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 LRRC47Q8N1G4 583 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 FBXW5Q969U6 566 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 ZG16BQ96DA0 208 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 CLIP3Q96DZ5 547 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 PRRX2Q99811 253 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 AGO3Q9H9G7 860 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 Q9UFV3 132 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 AQP7O14520 342 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 KLF4O43474 513 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 SLC26A4O43511 780 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 KRT4P19013 534 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 MEOX1P50221 254 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 CD83Q01151 205 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 ANKS3Q6ZW76 656 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 ULK2Q8IYT8 1036 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 D2HGDHQ8N465 521 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 OR14K1Q8NGZ2 314 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 PCDH19Q8TAB3 1148 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 CBLCQ9ULV8 474 aa6.87□□□□□ -1.31
TRAPPC13-209ENST00000508304 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 CAPN14A8MX76 684 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 PEX11BO96011 259 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 PYGMP11217 842 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 ECE1P42892 770 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 JAM2P57087 298 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 ARID5AQ03989 594 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 C16orf59Q7L2K0 433 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 RTKN2Q8IZC4 609 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 SHCBP1Q8NEM2 672 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 CRAMP1Q96RY5 1269 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 TINF2Q9BSI4 451 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 OR10A5Q9H207 317 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 CATSPERZQ9NTU4 200 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 PARPBPQ9NWS1 579 aa6.86□□□□□ -1.31
TRAPPC13-209ENST00000508304 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 ARVCFO00192 962 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 CYP27B1O15528 508 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 CLASP2O75122 1294 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 PPFIA2O75334 1257 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 LRSAM1Q6UWE0 723 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 TMEM176AQ96HP8 235 aa6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 REXO2Q9Y3B8 237 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-209ENST00000508304 KRT15P19012 456 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 COL10A1Q03692 680 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 MOGSQ13724 837 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 RRP1BQ14684 758 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 SEC23AQ15436 765 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 PTPRN2Q92932 1015 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 ZNF669Q96BR6 464 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 MPHOSPH9Q99550 1183 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 SMURF1Q9HCE7 757 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 UCKL1Q9NWZ5 548 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 PCDHA8Q9Y5H6 950 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 TNFRSF18Q9Y5U5 241 aa6.84□□□□□ -1.31
TRAPPC13-209ENST00000508304 PCSK5Q92824 1860 aa6.83□□□□□ -1.32
TRAPPC13-209ENST00000508304 RAMP2O60895 175 aa6.83□□□□□ -1.32
TRAPPC13-209ENST00000508304 STAT5BP51692 787 aa6.83□□□□□ -1.32
TRAPPC13-209ENST00000508304 GRAMD4Q6IC98 578 aa6.83□□□□□ -1.32
TRAPPC13-209ENST00000508304 EP400NLQ6ZTU2 488 aa6.83□□□□□ -1.32
TRAPPC13-209ENST00000508304 SLC25A3Q00325 362 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 RIN1Q13671 783 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 CRY1Q16526 586 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 WDR48Q8TAF3 677 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 FAM184BQ9ULE4 1060 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 SH3BP1Q9Y3L3 701 aa6.82□□□□□ -1.32
TRAPPC13-209ENST00000508304 KCNK3O14649 394 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 FOXN1O15353 648 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 MMEP08473 750 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 C6orf222P0C671 652 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 ST5P78524 1137 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 LACTBP83111 547 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 CRHR2Q13324 411 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 SCUBE1Q8IWY4 988 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
TRAPPC13-209ENST00000508304 ADCY3O60266 1144 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 MAFO75444 373 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 GUCY1A3Q02108 690 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 SAFB2Q14151 953 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 DPY19L2P1Q6NXN4 242 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 BCL6BQ8N143 479 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 ASB15Q8WXK1 588 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 RABGGTAQ92696 567 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 CTDP1Q9Y5B0 961 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-209ENST00000508304 CCDC66A2RUB6 948 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 GSTA4O15217 222 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 NAT1P18440 290 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 RAB33AQ14088 237 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 NOSTRINQ8IVI9 506 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms