RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 LENG9Q96B70 501 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 UPF3BQ9BZI7 483 aaKnown RBP23.59■■□□□ 1.37
CLDND1-216ENST00000507944 UBE2ZQ9H832 354 aaPredicted RBP23.59■■□□□ 1.37
CLDND1-216ENST00000507944 GINS2Q9Y248 185 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 RWDD3Q9Y3V2 267 aa23.59■■□□□ 1.37
CLDND1-216ENST00000507944 RB1P06400 928 aa23.58■■□□□ 1.37
CLDND1-216ENST00000507944 BTG3Q14201 252 aaPredicted RBP23.58■■□□□ 1.37
CLDND1-216ENST00000507944 TRMT1LQ7Z2T5 733 aaKnown RBP23.58■■□□□ 1.37
CLDND1-216ENST00000507944 GABBR1Q9UBS5 961 aa23.58■■□□□ 1.37
CLDND1-216ENST00000507944 SAMM50Q9Y512 469 aa23.58■■□□□ 1.37
CLDND1-216ENST00000507944 C5orf67F2Z3F1 127 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 LINC00271P0C7V0 271 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 NFX1Q12986 1120 aaKnown RBP23.57■■□□□ 1.36
CLDND1-216ENST00000507944 TMEM266Q2M3C6 531 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 TIGD5Q53EQ6 642 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 NPAS4Q8IUM7 802 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 CRIPAKQ8N1N5 446 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 BANK1Q8NDB2 785 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 CLP1Q92989 425 aaKnown RBP23.57■■□□□ 1.36
CLDND1-216ENST00000507944 CDHR5Q9HBB8 845 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 PDRG1Q9NUG6 133 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 PCDHA4Q9UN74 947 aa23.57■■□□□ 1.36
CLDND1-216ENST00000507944 MSH4O15457 936 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 DEXIO95424 95 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 STAG3L1P0CL83 205 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 STK3Q13188 491 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 CPLX2Q6PUV4 134 aaKnown RBP23.56■■□□□ 1.36
CLDND1-216ENST00000507944 TBCKQ8TEA7 893 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 C11orf84Q9BUA3 381 aaPredicted RBP23.56■■□□□ 1.36
CLDND1-216ENST00000507944 C22orf23Q9BZE7 217 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 TMX1Q9H3N1 280 aa23.56■■□□□ 1.36
CLDND1-216ENST00000507944 NOC2LQ9Y3T9 749 aaKnown RBP23.56■■□□□ 1.36
CLDND1-216ENST00000507944 WDR64B1ANS9 1081 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 RPS6KA5O75582 802 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 C22orf31O95567 290 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 KCNA5P22460 613 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 FAM43BQ6ZT52 329 aaPredicted RBP23.55■■□□□ 1.36
CLDND1-216ENST00000507944 METTL13Q8N6R0 699 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 RIT2Q99578 217 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 ERVK-5Q9HDB9 667 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 DISC1Q9NRI5 854 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 CEP131Q9UPN4 1083 aa23.55■■□□□ 1.36
CLDND1-216ENST00000507944 LEXMQ3ZCV2 418 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 TCEAL5Q5H9L2 206 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 ODR4Q5SWX8 454 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 CMTR2Q8IYT2 770 aaKnown RBP23.54■■□□□ 1.36
CLDND1-216ENST00000507944 BLIDQ8IZY5 108 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 TMEM40Q8WWA1 233 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 FAM167AQ96KS9 214 aa23.54■■□□□ 1.36
CLDND1-216ENST00000507944 NSUN3Q9H649 340 aaKnown RBP23.54■■□□□ 1.36
CLDND1-216ENST00000507944 GRM6O15303 877 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 MAGEB2O15479 319 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 GAS7O60861 476 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 CRYBB1P53674 252 aaPredicted RBP23.53■■□□□ 1.36
CLDND1-216ENST00000507944 KIZQ2M2Z5 673 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 PPP1R16BQ96T49 567 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 PLVAPQ9BX97 442 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 TEKT3Q9BXF9 490 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 LMAN2LQ9H0V9 348 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 NRBP2Q9NSY0 501 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 LRFN2Q9ULH4 789 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 ST3GAL5Q9UNP4 418 aa23.53■■□□□ 1.36
CLDND1-216ENST00000507944 MRPL42Q9Y6G3 142 aaKnown RBP23.53■■□□□ 1.36
CLDND1-216ENST00000507944 GPR182O15218 404 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 ZNF862O60290 1169 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 VTNP04004 478 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 SARSP49591 514 aaKnown RBP23.52■■□□□ 1.36
CLDND1-216ENST00000507944 Q4G0T1 1027 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 LRCH2Q5VUJ6 765 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 GALNT17Q6IS24 598 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 FAM177A1Q8N128 213 aaPredicted RBP23.52■■□□□ 1.36
CLDND1-216ENST00000507944 DAGLBQ8NCG7 672 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.52■■□□□ 1.36
CLDND1-216ENST00000507944 GJA10Q969M2 543 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 AIFM3Q96NN9 605 aa23.52■■□□□ 1.36
CLDND1-216ENST00000507944 CYP3A7-CYP3A51PA0A087WV96 503 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 M0R2N6 131 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 CHMP2AO43633 222 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 MGEA5O60502 916 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 GPR32O75388 356 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 IBSPP21815 317 aaPredicted RBP23.51■■□□□ 1.35
CLDND1-216ENST00000507944 CYP3A7P24462 503 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 SFNP31947 248 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 JAK3P52333 1124 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 PAN2Q504Q3 1202 aaKnown RBP23.51■■□□□ 1.35
CLDND1-216ENST00000507944 EFCAB12Q6NXP0 572 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 OSMRQ99650 979 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 ADAM2Q99965 735 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 UNC45AQ9H3U1 944 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 PPP4R2Q9NY27 417 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 PCDHB7Q9Y5E2 793 aa23.51■■□□□ 1.35
CLDND1-216ENST00000507944 DENND3A2RUS2 1198 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 PSMD10O75832 226 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 TDP2O95551 362 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 OATP04181 439 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 GATMP50440 423 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 CLCN3P51790 818 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 NPY5RQ15761 445 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 EP400NLQ6ZTU2 488 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms