RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 PAK2Q13177 524 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 BMS1Q14692 1282 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 PTPN14Q15678 1187 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 ZNF528Q3MIS6 628 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 IL31Q6EBC2 164 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 TAF2Q6P1X5 1199 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 DCLRE1AQ6PJP8 1040 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 CABP7Q86V35 215 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 MCF2L2Q86YR7 1114 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 IFNL3Q8IZI9 196 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 TMEM57Q8N5G2 664 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 DDX1Q92499 740 aaKnown RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 OSBP2Q969R2 916 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 BCO2Q9BYV7 579 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 FAM49AQ9H0Q0 323 aaPredicted RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 CWH43Q9H720 699 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 PXMP2Q9NR77 195 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 FBXO4Q9UKT5 387 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 ZNF215Q9UL58 517 aaPredicted RBP8.42□□□□□ -1.06
VCAN-207ENST00000507162 NRCAMQ92823 1304 aa8.42□□□□□ -1.06
VCAN-207ENST00000507162 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 WDR19Q8NEZ3 1342 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 M0QZ92 97 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 CFBP00751 764 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 CT47B1P0C2W7 299 aaPredicted RBP8.41□□□□□ -1.06
VCAN-207ENST00000507162 GOLGA8HP0CJ92 632 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 SRFP11831 508 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 SARSP49591 514 aaKnown RBP8.41□□□□□ -1.06
VCAN-207ENST00000507162 IGBP1P78318 339 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 MRPS6P82932 125 aaKnown RBP8.41□□□□□ -1.06
VCAN-207ENST00000507162 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 PPARAQ07869 468 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 TMEM266Q2M3C6 531 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 HSP90AB4PQ58FF6 505 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 IER5Q5VY09 327 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 TSSK4Q6SA08 328 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 KCNT2Q6UVM3 1135 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 UNQ6494/PRO21346Q6UXR6 183 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 CYFIP1Q7L576 1253 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 ST13P5Q8NFI4 369 aaPredicted RBP8.41□□□□□ -1.06
VCAN-207ENST00000507162 GLG1Q92896 1179 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 ZNF558Q96NG5 402 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 NACAP1Q9BZK3 213 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 EPC1Q9H2F5 836 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 CPVLQ9H3G5 476 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 ARHGEF3Q9NR81 526 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 DZANK1Q9NVP4 752 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 SPG21Q9NZD8 308 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 KAT6AQ92794 2004 aa8.41□□□□□ -1.06
VCAN-207ENST00000507162 ABCB11O95342 1321 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 CCDC171Q6TFL3 1326 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 DENND3A2RUS2 1198 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 GPAA1O43292 621 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 TGFB3P10600 412 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 FGFR1P11362 822 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 ATP5JP18859 108 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 GNAT2P19087 354 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 NCLP19338 710 aaKnown RBP8.4□□□□□ -1.06
VCAN-207ENST00000507162 PDE4AP27815 886 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 PPFIA1Q13136 1202 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 UBXN2BQ14CS0 331 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 GPR149Q86SP6 731 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 ZBTB44Q8NCP5 570 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 PJA1Q8NG27 643 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 AUTS2Q8WXX7 1259 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 ZBTB10Q96DT7 871 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 SHDQ96IW2 340 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 ADAM2Q99965 735 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 TMEM47Q9BQJ4 181 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 NAPBQ9H115 298 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 TMX1Q9H3N1 280 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 TOMM22Q9NS69 142 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 TUBE1Q9UJT0 475 aa8.4□□□□□ -1.06
VCAN-207ENST00000507162 KIAA1671Q9BY89 1806 aa8.4□□□□□ -1.07
VCAN-207ENST00000507162 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 FAM170BA6NMN3 283 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 SRRM3A6NNA2 597 aaPredicted RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 LILRB5O75023 590 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 MARK3P27448 753 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 PPM1AP35813 382 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 ZNF543Q08ER8 600 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 GRIK4Q16099 956 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 LETM2Q2VYF4 491 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 PRR23BQ6ZRT6 265 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 VSIG10LQ86VR7 867 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
VCAN-207ENST00000507162 KIF1BPQ96EK5 621 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 VAT1LQ9HCJ6 419 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 SEMA4GQ9NTN9 838 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 GINS2Q9Y248 185 aa8.39□□□□□ -1.07
VCAN-207ENST00000507162 MRPL11Q9Y3B7 192 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms