RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 NBNO60934 754 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 CAND2O75155 1236 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 SPATA31C1P0DKV0 1188 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 SHHQ15465 462 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 TMEM266Q2M3C6 531 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 MTERF2Q49AM1 385 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 TMEM240Q5SV17 173 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 FOXD4L5Q5VV16 416 aaPredicted RBP20.37■□□□□ 0.85
NPHP4-210ENST00000506941 DEFB128Q7Z7B8 93 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 TPH2Q8IWU9 490 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 C4orf19Q8IY42 314 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 IGSF22Q8N9C0 903 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 NEK9Q8TD19 979 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 FOXD4L4Q8WXT5 416 aaPredicted RBP20.37■□□□□ 0.85
NPHP4-210ENST00000506941 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.37■□□□□ 0.85
NPHP4-210ENST00000506941 ZSWIM4Q9H7M6 989 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 CEP131Q9UPN4 1083 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 SMIM35A0A1B0GVV1 85 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 RSPH10B2B2RC85 870 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 MED24O75448 989 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 CHRNA1P02708 482 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 RSPH10BP0C881 870 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 RFC2P35250 354 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 MGAT3Q09327 533 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 BECN1Q14457 450 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 SF3A1Q15459 793 aaKnown RBP20.36■□□□□ 0.85
NPHP4-210ENST00000506941 FAM26DQ5JW98 314 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 TDHQ8IZJ6 230 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 LINC01465Q8N7H1 131 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 ZNF579Q8NAF0 562 aaKnown RBP20.36■□□□□ 0.85
NPHP4-210ENST00000506941 ZSCAN16Q9H4T2 348 aaPredicted RBP20.36■□□□□ 0.85
NPHP4-210ENST00000506941 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
NPHP4-210ENST00000506941 PP2D1A8MPX8 630 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 DKC1O60832 514 aaKnown RBP eCLIP20.35■□□□□ 0.85
NPHP4-210ENST00000506941 LYPLA2O95372 231 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
NPHP4-210ENST00000506941 YWHABP31946 246 aaKnown RBP20.35■□□□□ 0.85
NPHP4-210ENST00000506941 NPEPPSP55786 919 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 TMEM62Q0P6H9 643 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 PDIA5Q14554 519 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 DTHD1Q6ZMT9 781 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 ZNF365Q70YC5 407 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 CATSPER3Q86XQ3 398 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 KIAA0319LQ8IZA0 1049 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 POLR3CQ9BUI4 534 aaPredicted RBP20.35■□□□□ 0.85
NPHP4-210ENST00000506941 LRWD1Q9UFC0 647 aa20.35■□□□□ 0.85
NPHP4-210ENST00000506941 MYH11P35749 1972 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 A0A087WWV3 80 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 A0A1W2PPC1 479 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 CXCL10P02778 98 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 CLCN3P51790 818 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 MRPS6P82932 125 aaKnown RBP20.34■□□□□ 0.85
NPHP4-210ENST00000506941 TBC1D8BQ0IIM8 1120 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 PTPAQ15257 358 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 TCTN1Q2MV58 587 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 ARL6IP4Q66PJ3 421 aaKnown RBP20.34■□□□□ 0.85
NPHP4-210ENST00000506941 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
NPHP4-210ENST00000506941 LRRC71Q8N4P6 559 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 METTL13Q8N6R0 699 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 TUFT1Q9NNX1 390 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 CYP26B1Q9NR63 512 aa20.34■□□□□ 0.85
NPHP4-210ENST00000506941 VWA3AA6NCI4 1184 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 MAGEB2O15479 319 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 PARNO95453 639 aaKnown RBP20.33■□□□□ 0.85
NPHP4-210ENST00000506941 F13A1P00488 732 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 RPA1P27694 616 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
NPHP4-210ENST00000506941 ECM1Q16610 540 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 EFCAB12Q6NXP0 572 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 POTEGQ6S5H5 508 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 RSPH3Q86UC2 560 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 RPUSD2Q8IZ73 545 aaKnown RBP20.33■□□□□ 0.85
NPHP4-210ENST00000506941 ERMNQ8TAM6 284 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 USP28Q96RU2 1077 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 MMTAG2Q9BU76 263 aaKnown RBP20.33■□□□□ 0.85
NPHP4-210ENST00000506941 CDY2AQ9Y6F7 541 aa20.33■□□□□ 0.85
NPHP4-210ENST00000506941 SZT2Q5T011 3432 aa20.33■□□□□ 0.84
NPHP4-210ENST00000506941 IGKV6-21A0A0C4DH24 114 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 MAFO75444 373 aaPredicted RBP20.32■□□□□ 0.84
NPHP4-210ENST00000506941 BMP15O95972 392 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 PFKMP08237 780 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
NPHP4-210ENST00000506941 CDC25AP30304 524 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 CEBPZQ03701 1054 aaKnown RBP20.32■□□□□ 0.84
NPHP4-210ENST00000506941 GRIN1Q05586 938 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 DRP2Q13474 957 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
NPHP4-210ENST00000506941 RASIP1Q5U651 963 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 PIGOQ8TEQ8 1089 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 CEP170P1Q96L14 293 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 RAB34Q9BZG1 259 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 ZDHHC9Q9Y397 364 aa20.32■□□□□ 0.84
NPHP4-210ENST00000506941 FGBP02675 491 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 VTNP04004 478 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 RPLP2P05387 115 aaKnown RBP20.31■□□□□ 0.84
NPHP4-210ENST00000506941 CCT6AP40227 531 aaKnown RBP20.31■□□□□ 0.84
NPHP4-210ENST00000506941 XKR9Q5GH70 373 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 HAUS3Q68CZ6 603 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 OTUD6AQ7L8S5 288 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 OTOP2Q7RTS6 562 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms