RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 NENFQ9UMX5 172 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.22
HERC6-206ENST00000506714 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 NPHP3-ACAD11A0A0J9YXS1 232 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 ACTN1P12814 892 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 CYP3A7P24462 503 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 RPL13P26373 211 aaKnown RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 SMTNP53814 917 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 PPP2R2AP63151 447 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 ARSHQ5FYA8 562 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 SEC14L1Q92503 715 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 CYFIP2Q96F07 1278 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 PPANQ9NQ55 473 aaKnown RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 A1CFQ9NQ94 594 aaKnown RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 DIS3Q9Y2L1 958 aaKnown RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 CDR1P51861 262 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 MFSD14BQ5SR56 506 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 AP1M1Q9BXS5 423 aa16.39■□□□□ 0.21
HERC6-206ENST00000506714 TTC7AQ9ULT0 858 aaPredicted RBP16.39■□□□□ 0.21
HERC6-206ENST00000506714 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 MYO1FO00160 1098 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 SLC16A3O15427 465 aaKnown RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 PAEPP09466 180 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 AKR1B1P15121 316 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 FERP16591 822 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 IFT88Q13099 833 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 EPHA7Q15375 998 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 CCDC121Q6ZUS5 278 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 GJA10Q969M2 543 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 MBOAT7Q96N66 472 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 DDX47Q9H0S4 455 aaKnown RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 UTP11Q9Y3A2 253 aaKnown RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 UFL1O94874 794 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 EIF3BP55884 814 aaKnown RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 JAM2P57087 298 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 GIT2Q14161 759 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 EPM2AIP1Q7L775 607 aaPredicted RBP16.38■□□□□ 0.21
HERC6-206ENST00000506714 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
HERC6-206ENST00000506714 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
HERC6-206ENST00000506714 GOLGA6L7A0A1B0GV03 622 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
HERC6-206ENST00000506714 MED24O75448 989 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 GPSM2P81274 684 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 NT5DC3Q86UY8 548 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 SYT2Q8N9I0 419 aaPredicted RBP16.37■□□□□ 0.21
HERC6-206ENST00000506714 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
HERC6-206ENST00000506714 HES6Q96HZ4 224 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
HERC6-206ENST00000506714 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
HERC6-206ENST00000506714 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 AMFRQ9UKV5 643 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 DNM3Q9UQ16 869 aa16.37■□□□□ 0.21
HERC6-206ENST00000506714 TBX3O15119 743 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 CLUL1Q15846 466 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 BMT2Q1RMZ1 405 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 TMC3Q7Z5M5 1100 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 DAAM2Q86T65 1068 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 OR2W6PQ8NHA6 318 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 P3H4Q92791 437 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 NEUROG2Q9H2A3 272 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 CNOT10Q9H9A5 744 aaKnown RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 AMACRQ9UHK6 382 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 C5orf60A6NFR6 353 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 DAPK3O43293 454 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 RPA1P27694 616 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 FMNL3Q8IVF7 1028 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 FLAD1Q8NFF5 587 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 NAP1L3Q99457 506 aaPredicted RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
HERC6-206ENST00000506714 BCCIPQ9P287 314 aaKnown RBP eCLIP16.36■□□□□ 0.21
HERC6-206ENST00000506714 GREB1LQ9C091 1923 aaPredicted RBP16.36■□□□□ 0.21
HERC6-206ENST00000506714 USP17L10C9JJH3 530 aa16.35■□□□□ 0.21
HERC6-206ENST00000506714 STAT1P42224 750 aa16.35■□□□□ 0.21
HERC6-206ENST00000506714 CASP5P51878 434 aa16.35■□□□□ 0.21
HERC6-206ENST00000506714 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
HERC6-206ENST00000506714 DCAF17Q5H9S7 520 aaPredicted RBP16.35■□□□□ 0.21
HERC6-206ENST00000506714 TAX1BP1Q86VP1 789 aa16.35■□□□□ 0.21
HERC6-206ENST00000506714 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms