RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 NME8Q8N427 588 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 LINC01599Q8WXQ3 324 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 TGS1Q96RS0 853 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 KCNJ14Q9UNX9 436 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 EYSQ5T1H1 3165 aa10.27□□□□□ -0.77
PDLIM5-209ENST00000506632 ENPP3O14638 875 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 ZNF862O60290 1169 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 TDP2O95551 362 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 CD52P31358 61 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 NUBP1P53384 320 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 NONOQ15233 471 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 CCDC85BQ15834 202 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 ME3Q16798 604 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 KRT40Q6A162 431 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 KRT25Q7Z3Z0 450 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 KIAA0319LQ8IZA0 1049 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 LINC01465Q8N7H1 131 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 RDM1Q8NG50 284 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 ETNPPLQ8TBG4 499 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 GDPD5Q8WTR4 605 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 PPM1EQ8WY54 764 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 GJA10Q969M2 543 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 FAM167AQ96KS9 214 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 UNC45AQ9H3U1 944 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 SUGCTQ9HAC7 445 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 DISC1Q9NRI5 854 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 GJB4Q9NTQ9 266 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 LMCD1Q9NZU5 365 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 GABBR1Q9UBS5 961 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 TCEAL9Q9UHQ7 104 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 LOXHD1Q8IVV2 1947 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 PRUNE2Q8WUY3 3088 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 EVPLQ92817 2033 aa10.26□□□□□ -0.77
PDLIM5-209ENST00000506632 BRWD1Q9NSI6 2320 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 M0QZ92 97 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 SLC37A4O43826 429 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 GAS7O60861 476 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 DTNBO60941 627 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 LINC00271P0C7V0 271 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 SFNP31947 248 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 JAK3P52333 1124 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 TMEM62Q0P6H9 643 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 UGCGQ16739 394 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 INF2Q27J81 1249 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 LRCH2Q5VUJ6 765 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 RTN4RL1Q86UN2 441 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 NSUN7Q8NE18 718 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 ZNF689Q96CS4 500 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 YME1L1Q96TA2 773 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 C17orf80Q9BSJ5 609 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 TEKT3Q9BXF9 490 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 FTHL17Q9BXU8 183 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 CDHR5Q9HBB8 845 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 ORC3Q9UBD5 711 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 PADI3Q9ULW8 664 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 NCOR1O75376 2440 aa10.25□□□□□ -0.77
PDLIM5-209ENST00000506632 SPTBN5Q9NRC6 3674 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 RALGAPA2Q2PPJ7 1873 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 NLRC5Q86WI3 1866 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 GPR32O75388 356 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 UPP2O95045 317 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 STBD1O95210 358 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 OATP04181 439 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 XBP1P17861 261 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 NEK4P51957 841 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 PRKCEQ02156 737 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 CKAP2LQ8IYA6 745 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 NECAB1Q8N987 351 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 CEP89Q96ST8 783 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 TMX1Q9H3N1 280 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 ERVK-5Q9HDB9 667 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 KCNMB3Q9NPA1 279 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 SAMM50Q9Y512 469 aa10.24□□□□□ -0.77
PDLIM5-209ENST00000506632 CCDC194A0A1B0GVG4 234 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 MAGEB2O15479 319 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 CHMP2AO43633 222 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 DGKIO75912 1065 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 GCFC2P16383 781 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms