RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SMIM10L2BP0DMW5 78 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 FDX1P10109 184 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 PBX3P40426 434 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 FNTBP49356 437 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RIPPLY3P57055 190 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 PRKCQQ04759 706 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 COLEC12Q5KU26 742 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 FAM102BQ5T8I3 360 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 C12orf60Q5U649 245 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RNF43Q68DV7 783 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RSPO2Q6UXX9 243 aaPredicted RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RUFY4Q6ZNE9 571 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 DHX37Q8IY37 1157 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 THNSL1Q8IYQ7 743 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 C12orf50Q8NA57 414 aaPredicted RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 LSM14AQ8ND56 463 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 PPTC7Q8NI37 304 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 MKL1Q969V6 931 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 SHDQ96IW2 340 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 NEUROD6Q96NK8 337 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 KLHL5Q96PQ7 755 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 TMX1Q9H3N1 280 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 FZD8Q9H461 694 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 SFXN1Q9H9B4 322 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 WDR6Q9NNW5 1121 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 JADE2Q9NQC1 790 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 FAM217BQ9NTX9 383 aaPredicted RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RNF19AQ9NV58 838 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 TYW1Q9NV66 732 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 ADD3Q9UEY8 706 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 DDX41Q9UJV9 622 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 AKAP2Q9Y2D5 859 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 IRAK3Q9Y616 596 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 NUMBLQ9Y6R0 609 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 PTPRDP23468 1912 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 SETD2Q9BYW2 2564 aaPredicted RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 A0A087WV48 116 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 C17orf102A2RUQ5 167 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 CDX4O14627 284 aaPredicted RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 AXIN1O15169 862 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 MGEA5O60502 916 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 LILRB3O75022 631 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 LAMP2P13473 410 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 SCG2P13521 617 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 POU3F2P20265 443 aaPredicted RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 RASA1P20936 1047 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 CD52P31358 61 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 NRLP54845 237 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 SATB1Q01826 763 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 KCNC4Q03721 635 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 EXOSC9Q06265 439 aaKnown RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 PDE4DQ08499 809 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 SMC1AQ14683 1233 aaKnown RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 NONOQ15233 471 aaKnown RBP eCLIP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 HSDL1Q3SXM5 330 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 SLC44A4Q53GD3 710 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 ZBTB41Q5SVQ8 909 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 C15orf39Q6ZRI6 1047 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 TSHZ1Q6ZSZ6 1077 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 CHST3Q7LGC8 479 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 RAB44Q7Z6P3 723 aaPredicted RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 WWC1Q8IX03 1113 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 GMCL1P1Q8NEA9 526 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 MDM1Q8TC05 714 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 AUTS2Q8WXX7 1259 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 FGF14Q92915 247 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 ZNF512BQ96KM6 892 aaPredicted RBP4.01□□□□□ -1.77
TCOF1-208ENST00000506063 DBNDD2Q9BQY9 259 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 EDEM2Q9BV94 578 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 PCGF6Q9BYE7 350 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 ZBP1Q9H171 429 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 BCAS3Q9H6U6 928 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 ANTXR1Q9H6X2 564 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 C2orf42Q9NWW7 574 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 PRR12Q9ULL5 1215 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 PCNX1Q96RV3 2341 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 VWA8A3KMH1 1905 aa4.01□□□□□ -1.77
TCOF1-208ENST00000506063 CLUHO75153 1309 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 ZBED9Q6R2W3 1325 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 UTP20O75691 2785 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 HELZP42694 1942 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 LRBAP50851 2863 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 TCRBV5S4A2TA0A5A2 114 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 LNP1A1A4G5 178 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 TBKBP1A7MCY6 615 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 TMEM232C9JQI7 657 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 PRKAB2O43741 272 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 PLA2G6O60733 806 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 PPFIA4O75335 1185 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 IDH1O75874 414 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 PAPSS2O95340 614 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 WISP1O95388 367 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 ICAM1P05362 532 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 BMP3P12645 472 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 LAG3P18627 525 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 GBP2P32456 591 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 CNR2P34972 360 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 MPLP40238 635 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms