RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 HLTFQ14527 1009 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■□□□□ 9.5
PPARGC1A-204ENST00000506055 EPHA7Q15375 998 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLC27A3Q5K4L6 730 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 C10orf76Q5T2E6 689 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TMEM179Q6ZVK1 233 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLC35C1Q96A29 364 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TYW1Q9NV66 732 aaKnown RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 VAV3Q9UKW4 847 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 OPLAHO14841 1288 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLC26A4O43511 780 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 ZEB2O60315 1214 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 FLOT1O75955 427 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 GFPT2O94808 682 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 KIF4AO95239 1232 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 CFBP00751 764 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 FOSP01100 380 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 BMP3P12645 472 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 NMT1P30419 496 aaKnown RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 PPARDQ03181 441 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 RINT1Q6NUQ1 792 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 PODNQ7Z5L7 613 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 DAAM2Q86T65 1068 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 IQCKQ8N0W5 287 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 CENPHQ9H3R5 247 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TDRD3Q9H7E2 651 aaKnown RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 EIF3HO15372 352 aaKnown RBP eCLIP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 TGFB1I1O43294 461 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 PDCLQ13371 301 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 COG2Q14746 738 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 RBM26Q5T8P6 1007 aaKnown RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 PEX26Q7Z412 305 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 VPS36Q86VN1 386 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 DDX42Q86XP3 938 aaKnown RBP eCLIP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 U2AF1L4Q8WU68 220 aaKnown RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 METTL14Q9HCE5 456 aaKnown RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 SIX2Q9NPC8 291 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 AFF2P51816 1311 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 LTBP1Q14766 1721 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 A0A1W2PRG0 241 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLITRK3O94933 977 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 FAM13AO94988 1023 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 EYA4O95677 639 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 MCTP2Q6DN12 878 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 MAATS1Q7Z4T9 603 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 METTL13Q8N6R0 699 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 LRRC57Q8N9N7 239 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 RDH13Q8NBN7 331 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 TPCN2Q8NHX9 752 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 PIK3R5Q8WYR1 880 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 GMCL1Q96IK5 515 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 DYDC2Q96IM9 177 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 DDX47Q9H0S4 455 aaKnown RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 TAF1DQ9H5J8 278 aaPredicted RBP8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 TMEM59LQ9UK28 342 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
PPARGC1A-204ENST00000506055 SHTN1A0MZ66 631 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 KRIT1O00522 736 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 EBAG9O00559 213 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 SART1O43290 800 aaKnown RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ECE2O60344 883 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 H2AFZP0C0S5 128 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PDE6BP35913 854 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PSMC2P35998 433 aaKnown RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ECE1P42892 770 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 CYP2J2P51589 502 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 JAM2P57087 298 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 CORO7P57737 925 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 CCDC174Q6PII3 467 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 H2AFVQ71UI9 128 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 OTOP1Q7RTM1 612 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 GLYCTKQ8IVS8 523 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 FAM186BQ8IYM0 893 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 LMBR1Q8WVP7 490 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PBKQ96KB5 322 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 CSRNP1Q96S65 589 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 HSD17B14Q9BPX1 270 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 POLR3CQ9BUI4 534 aaPredicted RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 GRIN2DO15399 1336 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PGRMC1O00264 195 aaKnown RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLC16A3O15427 465 aaKnown RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 EVI5O60447 810 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 MMP10P09238 476 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ITGA4P13612 1032 aa8.31□□□□□ -1.08
PPARGC1A-204ENST00000506055 ABCB4P21439 1286 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms