RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 HAS1Q92839 578 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 FAM161BQ96MY7 647 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 IFIH1Q9BYX4 1025 aaKnown RBP12.84□□□□□ -0.35
KDM3B-203ENST00000505756 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
KDM3B-203ENST00000505756 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 CDY2AQ9Y6F7 541 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 TET1Q8NFU7 2136 aa12.83□□□□□ -0.35
KDM3B-203ENST00000505756 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 MAGEB2O15479 319 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 C22orf31O95567 290 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 BRD1O95696 1058 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 RABGGTBP53611 331 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
KDM3B-203ENST00000505756 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
KDM3B-203ENST00000505756 GUCD1Q96NT3 240 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.36
KDM3B-203ENST00000505756 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 SQORQ9Y6N5 450 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 KDM3AQ9Y4C1 1321 aa12.83□□□□□ -0.36
KDM3B-203ENST00000505756 EML1O00423 815 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 NEMFO60524 1076 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
KDM3B-203ENST00000505756 AMHP03971 560 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 GHRP10912 638 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 PSMC5P62195 406 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 DEFB103AP81534 67 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
KDM3B-203ENST00000505756 LPIN1Q14693 890 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 CALCRLQ16602 461 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 XKR3Q5GH77 459 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 FBXO47Q5MNV8 452 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 CLEC17AQ6ZS10 378 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 NOSTRINQ8IVI9 506 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 KIAA0319LQ8IZA0 1049 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 USP38Q8NB14 1042 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
KDM3B-203ENST00000505756 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 NKX2-4Q9H2Z4 354 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 STXBP5LQ9Y2K9 1186 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 TCHHQ07283 1943 aa12.82□□□□□ -0.36
KDM3B-203ENST00000505756 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 SIP14410 1827 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 WNT7AO00755 349 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 MYOGP15173 224 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 SYT1P21579 422 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 TMOD1P28289 359 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 QARSP47897 775 aaKnown RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 EPHA7Q15375 998 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 PPP2R2DQ66LE6 453 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.81□□□□□ -0.361e-10■■■■■ 30
KDM3B-203ENST00000505756 METTL13Q8N6R0 699 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 CDX2Q99626 313 aaPredicted RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 NIFKQ9BYG3 293 aaKnown RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
KDM3B-203ENST00000505756 PCDHA12Q9UN75 941 aa12.81□□□□□ -0.36
KDM3B-203ENST00000505756 GBF1Q92538 1859 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 STX6O43752 255 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 TLL1O43897 1013 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 STBD1O95210 358 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 GJB5O95377 273 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 P4HBP07237 508 aaKnown RBP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 CA3P07451 260 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 ATP2B1P20020 1258 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 TRAPPC10P48553 1259 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 GRIN2CQ14957 1233 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 EFCAB12Q6NXP0 572 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 FAM43BQ6ZT52 329 aaPredicted RBP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 LINC01465Q8N7H1 131 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 RAD9AQ99638 391 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 TTC12Q9H892 705 aaPredicted RBP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
KDM3B-203ENST00000505756 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
KDM3B-203ENST00000505756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.79□□□□□ -0.36
KDM3B-203ENST00000505756 DDX11L8A8MPP1 907 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 RBAK-RBAKDNI3L0D1 243 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 CD52P31358 61 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 MCM7P33993 719 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 TXKP42681 527 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 CLCN3P51790 818 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
KDM3B-203ENST00000505756 TTC38Q5R3I4 469 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms