RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 OSBP2Q969R2 916 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 SMOC2Q9H3U7 446 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 ZNF287Q9HBT7 754 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 IL17RBQ9NRM6 502 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 DENND4AQ7Z401 1863 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 TREHO43280 583 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 NMT2O60551 498 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 CAND2O75155 1236 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 IFIT2P09913 472 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 RLBP1P12271 317 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 PUM1Q14671 1186 aaKnown RBP eCLIP8.22□□□□□ -1.09
VCAN-206ENST00000505615 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.09
VCAN-206ENST00000505615 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 SEPT14Q6ZU15 432 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 NANOS1Q8WY41 292 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 APBB2Q92870 758 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 KIF1BPQ96EK5 621 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 MPHOSPH6Q99547 160 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 DLL3Q9NYJ7 618 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 DDX41Q9UJV9 622 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
VCAN-206ENST00000505615 MRPL42Q9Y6G3 142 aaKnown RBP8.22□□□□□ -1.09
VCAN-206ENST00000505615 CEP295Q9C0D2 2601 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
VCAN-206ENST00000505615 GPAA1O43292 621 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 DGKIO75912 1065 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 SP100P23497 879 aaPredicted RBP8.21□□□□□ -1.1
VCAN-206ENST00000505615 TDO2P48775 406 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 KCNC3Q14003 757 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
VCAN-206ENST00000505615 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 NAALADL2Q58DX5 795 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 HSP90AB4PQ58FF6 505 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 FAM26DQ5JW98 314 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 SYCE2Q6PIF2 218 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 RBM23Q86U06 439 aaKnown RBP8.21□□□□□ -1.1
VCAN-206ENST00000505615 UBALD2Q8IYN6 164 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 KIAA2013Q8IYS2 634 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 KLHL23Q8NBE8 558 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 POF1BQ8WVV4 589 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 LINC01599Q8WXQ3 324 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 ATP6V0A1Q93050 837 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 TAAR1Q96RJ0 339 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 C16orf70Q9BSU1 422 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 SORCS3Q9UPU3 1222 aa8.21□□□□□ -1.1
VCAN-206ENST00000505615 C17orf102A2RUQ5 167 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 B4DLN1 442 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 M0R2C6 588 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 SMIM10L2AP0DMW4 78 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 SMIM10L2BP0DMW5 78 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 CLCN5P51795 746 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 MRPL12P52815 198 aaKnown RBP8.2□□□□□ -1.1
VCAN-206ENST00000505615 PTSQ03393 145 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 MTMR3Q13615 1198 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 QPCTQ16769 361 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 HSDL1Q3SXM5 330 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 ZSCAN25Q6NSZ9 544 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 ZBTB33Q86T24 672 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 CCDC105Q8IYK2 499 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 RGS22Q8NE09 1264 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 SYTL5Q8TDW5 730 aaPredicted RBP8.2□□□□□ -1.1
VCAN-206ENST00000505615 TBC1D5Q92609 795 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 APPBP2Q92624 585 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 EHMT1Q9H9B1 1298 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 LIMD1Q9UGP4 676 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 CDH22Q9UJ99 828 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 FRMPD2Q68DX3 1309 aaPredicted RBP8.2□□□□□ -1.1
VCAN-206ENST00000505615 DOCK8Q8NF50 2099 aa8.2□□□□□ -1.1
VCAN-206ENST00000505615 TTLL8A6PVC2 850 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 C2CD4DB7Z1M9 353 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 RNF225M0QZC1 329 aaPredicted RBP8.19□□□□□ -1.1
VCAN-206ENST00000505615 PER2O15055 1255 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 PI15O43692 258 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 CHRNA1P02708 482 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 GHRP10912 638 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 ADAM17P78536 824 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 PPARAQ07869 468 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 MGAT3Q09327 533 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 ANGPT1Q15389 498 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 DUSP6Q16828 381 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 MYSM1Q5VVJ2 828 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 ANKRD54Q6NXT1 300 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
VCAN-206ENST00000505615 ITPRIPQ8IWB1 547 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 CMTR2Q8IYT2 770 aaKnown RBP8.19□□□□□ -1.1
VCAN-206ENST00000505615 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 NSUN6Q8TEA1 469 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms