RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 ANKRD54Q6NXT1 300 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 CASC1Q6TDU7 716 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 CYB5R4Q7L1T6 521 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 S1PR5Q9H228 398 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 ENTPD7Q9NQZ7 604 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
NEDD9-210ENST00000505589 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 GLP2RO95838 553 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ITGB5P18084 799 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 NBL1P41271 181 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 MTHFRP42898 656 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 CLCN5P51795 746 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ERVFC1P60507 584 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 PLCB4Q15147 1175 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ZNF484Q5JVG2 852 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ATAT1Q5SQI0 421 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 TMC7Q7Z402 723 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ADAM2Q99965 735 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 KCNH7Q9NS40 1196 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 TYW1Q9NV66 732 aaKnown RBP11.31□□□□□ -0.6
NEDD9-210ENST00000505589 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 CEP131Q9UPN4 1083 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
NEDD9-210ENST00000505589 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
NEDD9-210ENST00000505589 COL1A2P08123 1366 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 FSCN2O14926 492 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 ATG7O95352 703 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 KLRC1P26715 233 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 TMOD1P28289 359 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-210ENST00000505589 FAM189BP81408 668 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 NUCB1Q02818 461 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 NFXL1Q6ZNB6 911 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-210ENST00000505589 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 TCEAL9Q9UHQ7 104 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 ST3GAL5Q9UNP4 418 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 GINS2Q9Y248 185 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
NEDD9-210ENST00000505589 C9IYK1 514 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 E7EWF7 191 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 BACH1O14867 736 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 MAGEB2O15479 319 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 EOMESO95936 686 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 CYP21A2P08686 494 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ZNF76P36508 570 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ALDH7A1P49419 539 aaKnown RBP11.29□□□□□ -0.6
NEDD9-210ENST00000505589 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ACTR2P61160 394 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 KCNC3Q14003 757 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
NEDD9-210ENST00000505589 CEP55Q53EZ4 464 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 FAM102BQ5T8I3 360 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-210ENST00000505589 KCNT2Q6UVM3 1135 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 SPG21Q9NZD8 308 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 TRIOO75962 3097 aa11.29□□□□□ -0.6
NEDD9-210ENST00000505589 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
NEDD9-210ENST00000505589 MCM5P33992 734 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 MIS18BP1Q6P0N0 1132 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 ZDHHC14Q8IZN3 488 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
NEDD9-210ENST00000505589 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
NEDD9-210ENST00000505589 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 TBC1D22BQ9NU19 505 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 FAM86C1Q9NVL1 165 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
NEDD9-210ENST00000505589 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
NEDD9-210ENST00000505589 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.6
NEDD9-210ENST00000505589 IGKV6D-21A0A0A0MT36 114 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms