RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LZTS2Q9BRK4 669 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 C11orf84Q9BUA3 381 aaPredicted RBP6.7□□□□□ -1.34
GYPB-205ENST00000505583 AGO4Q9HCK5 861 aaKnown RBP6.7□□□□□ -1.34
GYPB-205ENST00000505583 JPH1Q9HDC5 661 aaPredicted RBP6.7□□□□□ -1.34
GYPB-205ENST00000505583 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 CLEC1BQ9P126 229 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 SLC9A2Q9UBY0 812 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MUTYHQ9UIF7 546 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 CNTNAP5Q8WYK1 1306 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 IGSF9BQ9UPX0 1349 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ZNF318Q5VUA4 2279 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 KMT2EQ8IZD2 1858 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 IGKV6D-21A0A0A0MT36 114 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 RRN3P2A6NIE6 340 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 SPDYE3A6NKU9 549 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 ZBTB42B2RXF5 422 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 DDX39AO00148 427 aaKnown RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 PPFIA3O75145 1194 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 ATG7O95352 703 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 ATP4AP20648 1035 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 IBSPP21815 317 aaPredicted RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 GNAQP50148 359 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 STAT5BP51692 787 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 FOXK1P85037 733 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 MTHFD1LQ6UB35 978 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 RBM23Q86U06 439 aaKnown RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 RSPH3Q86UC2 560 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 RNF135Q8IUD6 432 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 CMTR2Q8IYT2 770 aaKnown RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 VN1R2Q8NFZ6 395 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 ESYT1Q9BSJ8 1104 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 MTA3Q9BTC8 594 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 PLVAPQ9BX97 442 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 CELF4Q9BZC1 486 aaKnown RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 LMAN2LQ9H0V9 348 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 FAM217BQ9NTX9 383 aaPredicted RBP6.69□□□□□ -1.34
GYPB-205ENST00000505583 PRKAG3Q9UGI9 489 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 TRPV2Q9Y5S1 764 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 TECTAO75443 2155 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 MUC6Q6W4X9 2439 aa6.69□□□□□ -1.34
GYPB-205ENST00000505583 MYH9P35579 1960 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 IGLV3-22A0A075B6J6 115 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 SMIM35A0A1B0GVV1 85 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 FAM86B1E9PN63 330 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 STXBP3O00186 592 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 MEIS1O00470 390 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 DPYSL4O14531 572 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 PER2O15055 1255 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 MAFGO15525 162 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 DHX15O43143 795 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 FAM86B2P0C5J1 330 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CALM1P0DP23 149 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CALM2P0DP24 149 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CALM3P0DP25 149 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 SCG2P13521 617 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 KLRC1P26715 233 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CDC27P30260 824 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 NRIP1P48552 1158 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CLK2P49760 499 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 NDUFV1P49821 464 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 ERVFC1P60507 584 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 KRT76Q01546 638 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 NHLH1Q02575 133 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 NFX1Q12986 1120 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 PAK2Q13177 524 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 CSPP1Q1MSJ5 1256 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 ADCK5Q3MIX3 580 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CEP55Q53EZ4 464 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 FAM102BQ5T8I3 360 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 IER5Q5VY09 327 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 APOA5Q6Q788 366 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 TMEM92Q6UXU6 159 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 PLPPR4Q7Z2D5 763 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 SGMS1Q86VZ5 419 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CCDC60Q8IWA6 550 aaPredicted RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 PLPP6Q8IY26 295 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 KIAA0319LQ8IZA0 1049 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 TMTC2Q8N394 836 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 POF1BQ8WVV4 589 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CRYGNQ8WXF5 182 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 P2RX5Q93086 422 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 PPP1R16BQ96T49 567 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 PHOX2BQ99453 314 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 ANO3Q9BYT9 981 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 ERVK-5Q9HDB9 667 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 RIC8AQ9NPQ8 531 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 CD207Q9UJ71 328 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 BARX2Q9UMQ3 279 aaPredicted RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 GINS2Q9Y248 185 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 NOC2LQ9Y3T9 749 aaKnown RBP6.68□□□□□ -1.34
GYPB-205ENST00000505583 RWDD3Q9Y3V2 267 aa6.68□□□□□ -1.34
GYPB-205ENST00000505583 SQORQ9Y6N5 450 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms