RNA–Protein interactions for RNA: ENST00000504968.6

SEC24B-203, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-203ENST00000504968 SLC8A1P32418 973 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 RHBDL3P58872 404 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 OTUD6AQ7L8S5 288 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
SEC24B-203ENST00000504968 MMGT1Q8N4V1 131 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 MYH6P13533 1939 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 POLE2P56282 527 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 TRAF1Q13077 416 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 TATDN2Q93075 761 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 CNGA1P29973 690 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
SEC24B-203ENST00000504968 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 KCNK3O14649 394 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 SNUPNO95149 360 aaKnown RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 FCER1AP12319 257 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ADCY2Q08462 1091 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 RBBP5Q15291 538 aaKnown RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 TRIM58Q8NG06 486 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 RBM28Q9NW13 759 aaKnown RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 DAPK3O43293 454 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 PLEKHA8P1O95397 391 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 STAT6P42226 847 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 HUNKP57058 714 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 PABPC4Q13310 644 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 PLS1Q14651 629 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 SEPT2Q15019 361 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 UAP1Q16222 522 aaPredicted RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 GMLQ99445 158 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 CAPN11Q9UMQ6 739 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 CEP104O60308 925 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ABL2P42684 1182 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ZNF844Q08AG5 666 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 MTMR14Q8NCE2 650 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 TMEM165Q9HC07 324 aa13.09□□□□□ -0.31
SEC24B-203ENST00000504968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.319e-8■■■■□ 26.7
SEC24B-203ENST00000504968 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
SEC24B-203ENST00000504968 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.31
SEC24B-203ENST00000504968 SLFN13Q68D06 897 aa13.08□□□□□ -0.31
SEC24B-203ENST00000504968 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.31
SEC24B-203ENST00000504968 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.31
SEC24B-203ENST00000504968 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.31
SEC24B-203ENST00000504968 DNAJC7Q99615 494 aa13.08□□□□□ -0.31
SEC24B-203ENST00000504968 AMACRQ9UHK6 382 aa13.08□□□□□ -0.31
SEC24B-203ENST00000504968 KLHL33A6NCF5 533 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 LRRC53A6NM62 1247 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 CFAP221Q4G0U5 840 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 GBA2Q9HCG7 927 aaPredicted RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 hCG_2014768A0A024R1R8 64 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 UBOX5O94941 541 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 SPP2Q13103 211 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 TAF11Q15544 211 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 LRRC34Q8IZ02 419 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 CCT6BQ92526 530 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 RWDD2AQ9UIY3 292 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ORC4O43929 436 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 LINGO3P0C6S8 592 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ITGA4P13612 1032 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ACTR5Q9H9F9 607 aaPredicted RBP13.08□□□□□ -0.32
SEC24B-203ENST00000504968 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
SEC24B-203ENST00000504968 ITIH6Q6UXX5 1313 aa13.07□□□□□ -0.32
SEC24B-203ENST00000504968 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
SEC24B-203ENST00000504968 AKR1B1P15121 316 aa13.07□□□□□ -0.32
SEC24B-203ENST00000504968 IL17AQ16552 155 aa13.07□□□□□ -0.32
SEC24B-203ENST00000504968 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
SEC24B-203ENST00000504968 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms