RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 NLRC4Q9NPP4 1024 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 MTMR4Q9NYA4 1195 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 EHD2Q9NZN4 543 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 COQ4Q9Y3A0 265 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 ANAPC1Q9H1A4 1944 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 ZSCAN5CA6NGD5 496 aaPredicted RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 STBD1O95210 358 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 KIF4AO95239 1232 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 MOCS3O95396 460 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 PTPN7P35236 360 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 CYLC1P35663 651 aaPredicted RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 CCT5P48643 541 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 GNAQP50148 359 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 ZNF543Q08ER8 600 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 PPP2R5CQ13362 524 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 MAP9Q49MG5 647 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 NEK8Q86SG6 692 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 PBKQ96KB5 322 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 MXD3Q9BW11 206 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 ANKRD2Q9GZV1 360 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 NAGPAQ9UK23 515 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 SCN8AQ9UQD0 1980 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 GNA14O95837 355 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 GCFC2P16383 781 aaKnown RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 SREBF1P36956 1147 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 STX17P56962 302 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 GRAPQ13588 217 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 CTC1Q2NKJ3 1217 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 FAM83BQ5T0W9 1011 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 CCDC84Q86UT8 332 aaPredicted RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 PPFIBP1Q86W92 1011 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 PACSIN1Q9BY11 444 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 RSPH14Q9UHP6 348 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 ADGRA3Q8IWK6 1321 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 KIAA0391O15091 583 aaKnown RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 CHRNA5P30532 468 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 SKIV2L2P42285 1042 aaKnown RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 AFMP43652 599 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 MGAT5Q09328 741 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 SP8Q8IXZ3 490 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 DENND1AQ8TEH3 1009 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 LARP4BQ92615 738 aaKnown RBP7.01□□□□□ -1.29
COPB2-204ENST00000504295 AZIN2Q96A70 460 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 CAPS2Q9BXY5 557 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 C17orf75Q9HAS0 396 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
COPB2-204ENST00000504295 A6NHS1 94 aa7□□□□□ -1.29
COPB2-204ENST00000504295 TMCO5BA8MYB1 307 aa7□□□□□ -1.29
COPB2-204ENST00000504295 DCDC2CA8MYV0 355 aa7□□□□□ -1.29
COPB2-204ENST00000504295 PDXKO00764 312 aa7□□□□□ -1.29
COPB2-204ENST00000504295 PPEF1O14829 653 aaPredicted RBP7□□□□□ -1.29
COPB2-204ENST00000504295 N4BP3O15049 544 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CHRNB2P17787 502 aa7□□□□□ -1.29
COPB2-204ENST00000504295 IGHMBP2P38935 993 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 CSRP3P50461 194 aa7□□□□□ -1.29
COPB2-204ENST00000504295 GFPT1Q06210 699 aaPredicted RBP7□□□□□ -1.29
COPB2-204ENST00000504295 ASPRV1Q53RT3 343 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CCDC122Q5T0U0 273 aa7□□□□□ -1.29
COPB2-204ENST00000504295 UTP4Q969X6 686 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 RNF25Q96BH1 459 aaPredicted RBP7□□□□□ -1.29
COPB2-204ENST00000504295 ZBED3Q96IU2 234 aaPredicted RBP7□□□□□ -1.29
COPB2-204ENST00000504295 FBXL18Q96ME1 805 aa7□□□□□ -1.29
COPB2-204ENST00000504295 PDLIM7Q9NR12 457 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CNNM1Q9NRU3 951 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CWC15Q9P013 229 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 COBLO75128 1261 aa7□□□□□ -1.29
COPB2-204ENST00000504295 KCNA3P22001 575 aa7□□□□□ -1.29
COPB2-204ENST00000504295 DNAJC21Q5F1R6 531 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
COPB2-204ENST00000504295 C1orf186Q6ZWK4 172 aa7□□□□□ -1.29
COPB2-204ENST00000504295 ANKRD18AQ8IVF6 992 aa7□□□□□ -1.29
COPB2-204ENST00000504295 ENDOVQ8N8Q3 282 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 MIGA1Q8NAN2 632 aa7□□□□□ -1.29
COPB2-204ENST00000504295 BBXQ8WY36 941 aaPredicted RBP7□□□□□ -1.29
COPB2-204ENST00000504295 GPKOWQ92917 476 aaPredicted RBP eCLIP7□□□□□ -1.292e-8■■■■□ 20.3
COPB2-204ENST00000504295 CYFIP2Q96F07 1278 aa7□□□□□ -1.29
COPB2-204ENST00000504295 EYA3Q99504 573 aa7□□□□□ -1.29
COPB2-204ENST00000504295 FAM107BQ9H098 131 aa7□□□□□ -1.29
COPB2-204ENST00000504295 ERVK-5Q9HDB9 667 aa7□□□□□ -1.29
COPB2-204ENST00000504295 ARHGEF3Q9NR81 526 aa7□□□□□ -1.29
COPB2-204ENST00000504295 GNL3LQ9NVN8 582 aaKnown RBP7□□□□□ -1.29
COPB2-204ENST00000504295 NR2E1Q9Y466 385 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CCDC188H7C350 402 aa7□□□□□ -1.29
COPB2-204ENST00000504295 PSMA7O14818 248 aa7□□□□□ -1.29
COPB2-204ENST00000504295 LYPLA2O95372 231 aa7□□□□□ -1.29
COPB2-204ENST00000504295 TMEM253P0C7T8 217 aa7□□□□□ -1.29
COPB2-204ENST00000504295 KIF5BP33176 963 aa7□□□□□ -1.29
COPB2-204ENST00000504295 STAT6P42226 847 aa7□□□□□ -1.29
COPB2-204ENST00000504295 CDK8P49336 464 aa7□□□□□ -1.29
COPB2-204ENST00000504295 GRIK3Q13003 919 aa7□□□□□ -1.29
COPB2-204ENST00000504295 FILIP1LQ4L180 1135 aa7□□□□□ -1.29
COPB2-204ENST00000504295 TAF7LQ5H9L4 462 aa7□□□□□ -1.29
COPB2-204ENST00000504295 VSTM1Q6UX27 236 aa7□□□□□ -1.29
COPB2-204ENST00000504295 SH3BP5LQ7L8J4 393 aa7□□□□□ -1.29
COPB2-204ENST00000504295 NLRP14Q86W24 1093 aa7□□□□□ -1.29
COPB2-204ENST00000504295 HOMER1Q86YM7 354 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms