RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 ERVK-21P61565 698 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 TMEM62Q0P6H9 643 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 CCDC85BQ15834 202 aaPredicted RBP20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 TSHZ1Q6ZSZ6 1077 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 TRMT1LQ7Z2T5 733 aaKnown RBP20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 WASF1Q92558 559 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 TEKT3Q9BXF9 490 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 COL25A1Q9BXS0 654 aaPredicted RBP20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 AGO3Q9H9G7 860 aaKnown RBP20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 DDX25Q9UHL0 483 aaKnown RBP20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 COL4A6Q14031 1691 aa20.34■□□□□ 0.85
SH3TC1-208ENST00000504223 WNT7AO00755 349 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 XBP1P17861 261 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 KLRC1P26715 233 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 GRB10Q13322 594 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 IER5Q5VY09 327 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 KRT40Q6A162 431 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 NEK8Q86SG6 692 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 TGS1Q96RS0 853 aaKnown RBP20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 KCNMB3Q9NPA1 279 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 TCEAL9Q9UHQ7 104 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 SAMM50Q9Y512 469 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 TRPV2Q9Y5S1 764 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 SQORQ9Y6N5 450 aa20.33■□□□□ 0.85
SH3TC1-208ENST00000504223 TTC3P53804 2025 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 COL4A4P53420 1690 aaPredicted RBP20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 MUC3AQ02505 3323 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 KDM3AQ9Y4C1 1321 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 BTBD18B2RXH4 712 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 C22orf31O95567 290 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 MMP1P03956 469 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 KRT2P35908 639 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 NME8Q8N427 588 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 BBXQ8WY36 941 aaPredicted RBP20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 HAS1Q92839 578 aa20.32■□□□□ 0.84
SH3TC1-208ENST00000504223 EML1O00423 815 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 STBD1O95210 358 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 CD52P31358 61 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 PRKCEQ02156 737 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 PPP4R3AQ6IN85 833 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 CKAP2LQ8IYA6 745 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 KIAA0319LQ8IZA0 1049 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 LINC01599Q8WXQ3 324 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 CELF4Q9BZC1 486 aaKnown RBP20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 VAV3Q9UKW4 847 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 MTUS1Q9ULD2 1270 aa20.31■□□□□ 0.84
SH3TC1-208ENST00000504223 ENPP3O14638 875 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 UPP2O95045 317 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 CD2BP2O95400 341 aaKnown RBP20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 JAK3P52333 1124 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 MIER3Q7Z3K6 550 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 DIS3L2Q8IYB7 885 aaKnown RBP20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 MICALL1Q8N3F8 863 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 GDPD5Q8WTR4 605 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 YME1L1Q96TA2 773 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 C17orf80Q9BSJ5 609 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 CDHR5Q9HBB8 845 aa20.3■□□□□ 0.84
SH3TC1-208ENST00000504223 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 M0QZ92 97 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 CCNT1O60563 726 aaKnown RBP20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 OATP04181 439 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 SFNP31947 248 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 LINC01465Q8N7H1 131 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 RC3H2Q9HBD1 1191 aaKnown RBP20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 THEGQ9P2T0 379 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
SH3TC1-208ENST00000504223 GCFC2P16383 781 aaKnown RBP20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 CRIPAKQ8N1N5 446 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 TMEM40Q8WWA1 233 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 ATXN2LQ8WWM7 1075 aaKnown RBP20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 FAM167AQ96KS9 214 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 CEP89Q96ST8 783 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 PPP1R16BQ96T49 567 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 LLPHQ9BRT6 129 aaKnown RBP20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 FTHL17Q9BXU8 183 aa20.28■□□□□ 0.84
SH3TC1-208ENST00000504223 BRWD1Q9NSI6 2320 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 TTC28Q96AY4 2481 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 CLCN3P51790 818 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 SPIRE1Q08AE8 756 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 PAK2Q13177 524 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 PPP2R5CQ13362 524 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 RABEP1Q15276 862 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 TARBP2Q15633 366 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 TJAP1Q5JTD0 557 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 BANK1Q8NDB2 785 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 ZSCAN31Q96LW9 406 aaPredicted RBP20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 SH2D3AQ9BRG2 576 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 TMX1Q9H3N1 280 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 LMCD1Q9NZU5 365 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 CEP131Q9UPN4 1083 aa20.27■□□□□ 0.84
SH3TC1-208ENST00000504223 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 MYO7AQ13402 2215 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms