RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF227Q86WZ6 799 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 TMEM145Q8NBT3 493 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 LPPQ93052 612 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 SEC16BQ96JE7 1060 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 ARHGAP28Q9P2N2 729 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 TESQ9UGI8 421 aaKnown RBP3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 STRIP2Q9ULQ0 834 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 C1RP00736 705 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 LTFP02788 710 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 MRE11P49959 708 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 HGFACQ04756 655 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 MAP4K2Q12851 820 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 TOB2Q14106 344 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 KIZQ2M2Z5 673 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 HABP4Q5JVS0 413 aaKnown RBP3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 LARP4Q71RC2 724 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 NT5DC4Q86YG4 428 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 RBM12BQ8IXT5 1001 aaKnown RBP3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 RTKN2Q8IZC4 609 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 NLGN4XQ8N0W4 816 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 WDR48Q8TAF3 677 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 THAP3Q8WTV1 239 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 RABGGTAQ92696 567 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 WNK4Q96J92 1243 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 SLC29A3Q9BZD2 475 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 KIAA1683Q9H0B3 1180 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 SYNPO2LQ9H987 977 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 CYP4F11Q9HBI6 524 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 SLC39A2Q9NP94 309 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 FZD1Q9UP38 647 aa3.46□□□□□ -1.86
HMGB3P17-201ENST00000504195 XDHP47989 1333 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 CNTNAP2Q9UHC6 1331 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 A0A0G2JNJ9 132 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 GRID2IPA4D2P6 1211 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 ACOT7O00154 380 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 FAM20BO75063 409 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 ZFPL1O95159 310 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 ITGB1P05556 798 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 GRK2P25098 689 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 GRK3P35626 688 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 SCNN1GP51170 649 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 SMAD3P84022 425 aaKnown RBP3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 RIN1Q13671 783 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 STILQ15468 1287 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 DENND5AQ6IQ26 1287 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 FBXO42Q6P3S6 717 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 OTOP2Q7RTS6 562 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 FILIP1Q7Z7B0 1213 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 KCTD13Q8WZ19 329 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 ANAPC16Q96DE5 110 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 C1orf159Q96HA4 380 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 MLST8Q9BVC4 326 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 SPATA5L1Q9BVQ7 753 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 GALNT8Q9NY28 637 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 Q9UFV3 132 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 FRMD4BQ9Y2L6 1034 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 SH3BP1Q9Y3L3 701 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 TELO2Q9Y4R8 837 aa3.45□□□□□ -1.86
HMGB3P17-201ENST00000504195 COL4A3Q01955 1670 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 A0A1W2PRX2 142 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 GOLGA6L6A8MZA4 724 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 TBX1O43435 398 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 CBSLP0DN79 551 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 CBSP35520 551 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 MFAP1P55081 439 aaKnown RBP3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 IL13RA1P78552 427 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 SF1Q15637 639 aaKnown RBP3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 RABL3Q5HYI8 236 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 ZNF276Q8N554 614 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 FAM169BQ8N8A8 192 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 OR14K1Q8NGZ2 314 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 ZFYVE21Q9BQ24 234 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 BTBD2Q9BX70 525 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 LGR4Q9BXB1 951 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 INCENPQ9NQS7 918 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 INPP5FQ9Y2H2 1132 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 INSL6Q9Y581 213 aa3.44□□□□□ -1.86
HMGB3P17-201ENST00000504195 NKRFO15226 690 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 COL6A2P12110 1019 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 PTGS1P23219 599 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 CLK3P49761 638 aaKnown RBP3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 HDLBPQ00341 1268 aaKnown RBP3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 ERCC6LQ2NKX8 1250 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 BTBD8Q5XKL5 378 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 TMEM200BQ69YZ2 307 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 Q6ZRM9 215 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 LRRC55Q6ZSA7 311 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 BEND2Q8NDZ0 799 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 GPR87Q9BY21 358 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 CCSER2Q9H7U1 834 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 AGO3Q9H9G7 860 aaKnown RBP3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 FAM184BQ9ULE4 1060 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 VWA7Q9Y334 891 aa3.43□□□□□ -1.86
HMGB3P17-201ENST00000504195 FAM47E-STBD1D6RA91 191 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 AGRPO00253 132 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 ADCY8P40145 1251 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 SESN2P58004 480 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms