RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CPA3P15088 417 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ATF6P18850 670 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SLC12A2P55011 1212 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 RAB14P61106 215 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PPIDQ08752 370 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ISLR2Q6UXK2 745 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 BRAPQ7Z569 592 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PANK1Q8TE04 598 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PHACTR3Q96KR7 559 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 CARD6Q9BX69 1037 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 GGA2Q9UJY4 613 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 ARL2BPQ9Y2Y0 163 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 SCAPERQ9BY12 1400 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 MAGEB16A2A368 324 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 HEXBP07686 556 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 PPP4CP60510 307 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 GRAMD2AQ8IUY3 354 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 NELFCDQ8IXH7 590 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TTC13Q8NBP0 860 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 COG8Q96MW5 612 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TESK2Q96S53 571 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 AIFM2Q9BRQ8 373 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 APOL6Q9BWW8 343 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 DNAJC17Q9NVM6 304 aaKnown RBP6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TRIM10Q9UDY6 481 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 TSPYL4Q9UJ04 414 aa6.7□□□□□ -1.34
CLCN3-204ENST00000504131 A8MXQ7 604 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 HLA-DRAP01903 254 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PYGMP11217 842 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 MTHFD1P11586 935 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 P4HA1P13674 534 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TCF7P36402 384 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SPAG1Q07617 926 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 EMC10Q5UCC4 262 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SMYD1Q8NB12 490 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CAPSLQ8WWF8 208 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 STAMBPL1Q96FJ0 436 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SLF1Q9BQI6 1058 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TRPC7Q9HCX4 862 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 VANGL2Q9ULK5 521 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PLEKHH1Q9ULM0 1364 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PDHBP11177 359 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SLC9A3P48764 834 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 RPP38P78345 283 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CTDSPL2Q05D32 466 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 NFYCQ13952 458 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 RASGRF1Q13972 1273 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PABPC1LQ4VXU2 614 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CAND1Q86VP6 1230 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CHERPQ8IWX8 916 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 NUP93Q8N1F7 819 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SYT2Q8N9I0 419 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PDCD6IPQ8WUM4 868 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 MPHOSPH8Q99549 860 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PLEKHA5Q9HAU0 1116 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SPO11Q9Y5K1 396 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SYF2O95926 243 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CKBP12277 381 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 EPB42P16452 691 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 HSPA9P38646 679 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 OTUD4Q01804 1114 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 BRDTQ58F21 947 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 HMBOX1Q6NT76 420 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SWSAP1Q6NVH7 229 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TBC1D9Q6ZT07 1266 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TAS2R42Q7RTR8 314 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 LONP2Q86WA8 852 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 OTUD5Q96G74 571 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SPASTQ9UBP0 616 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 RBMX2Q9Y388 322 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC163A0A0D9SF12 145 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CAPN14A8MX76 684 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CHD1O14646 1710 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 GSTA2P09210 222 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 GJC1P36383 396 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 AARSP49588 968 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 ERFP50548 548 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CCT8P50990 548 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 IFI16Q16666 785 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SNRNP48Q6IEG0 339 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 CYP4F22Q6NT55 531 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TRMT10CQ7L0Y3 403 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 ICA1LQ8NDH6 482 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 DQX1Q8TE96 717 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 PSPC1Q8WXF1 523 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 MAELQ96JY0 434 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 MRPL1Q9BYD6 325 aaKnown RBP6.69□□□□□ -1.34
CLCN3-204ENST00000504131 SLC40A1Q9NP59 571 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 VPS45Q9NRW7 570 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 GAKO14976 1311 aa6.69□□□□□ -1.34
CLCN3-204ENST00000504131 ZSCAN5BA6NJL1 495 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ZBTB39O15060 712 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 CHEK2O96017 543 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms