RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 BLIDQ8IZY5 108 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 LRFN2Q9ULH4 789 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 SQORQ9Y6N5 450 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 IGSF9BQ9UPX0 1349 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 MSH4O15457 936 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 EIF5BO60841 1220 aaKnown RBP24.92■■□□□ 1.58
LSM6-203ENST00000503982 ATP4AP20648 1035 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 LRCH2Q5VUJ6 765 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 DISC1Q9NRI5 854 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 CEP131Q9UPN4 1083 aa24.92■■□□□ 1.58
LSM6-203ENST00000503982 MAFBQ9Y5Q3 323 aaPredicted RBP24.92■■□□□ 1.58
LSM6-203ENST00000503982 RPS6KA5O75582 802 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 STAG3L1P0CL83 205 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 ODR4Q5SWX8 454 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 EP400NLQ6ZTU2 488 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 MRPL38Q96DV4 380 aaKnown RBP24.91■■□□□ 1.58
LSM6-203ENST00000503982 FAM167AQ96KS9 214 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 AIFM3Q96NN9 605 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 RWDD3Q9Y3V2 267 aa24.91■■□□□ 1.58
LSM6-203ENST00000503982 H3BNC9 293 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 CSPG5O95196 566 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 XBP1P17861 261 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 NONOQ15233 471 aaKnown RBP eCLIP24.9■■□□□ 1.58
LSM6-203ENST00000503982 PAN2Q504Q3 1202 aaKnown RBP24.9■■□□□ 1.58
LSM6-203ENST00000503982 LINC01599Q8WXQ3 324 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 NECAB3Q96P71 396 aaPredicted RBP24.9■■□□□ 1.58
LSM6-203ENST00000503982 NRBP2Q9NSY0 501 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 AKT3Q9Y243 479 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 COL4A6Q14031 1691 aa24.9■■□□□ 1.58
LSM6-203ENST00000503982 KDM3AQ9Y4C1 1321 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 DENND3A2RUS2 1198 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 BMP1P13497 986 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 JAK3P52333 1124 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 KIZQ2M2Z5 673 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 TIGD5Q53EQ6 642 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 NPAS4Q8IUM7 802 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 KIAA0319LQ8IZA0 1049 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 GJA10Q969M2 543 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 LENG9Q96B70 501 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 OSMRQ99650 979 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 KCNJ14Q9UNX9 436 aa24.89■■□□□ 1.58
LSM6-203ENST00000503982 TTC28Q96AY4 2481 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 TDP2O95551 362 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 C22orf31O95567 290 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 VTNP04004 478 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 OATP04181 439 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 TMOD1P28289 359 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 SFNP31947 248 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 SCRN1Q12765 414 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 GALNT17Q6IS24 598 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 MIER3Q7Z3K6 550 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 MAP7D2Q96T17 732 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 RIT2Q99578 217 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 UNC45AQ9H3U1 944 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 CDHR5Q9HBB8 845 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 NOC2LQ9Y3T9 749 aaKnown RBP24.88■■□□□ 1.57
LSM6-203ENST00000503982 KIAA1671Q9BY89 1806 aa24.88■■□□□ 1.57
LSM6-203ENST00000503982 SPTBN5Q9NRC6 3674 aaKnown RBP24.88■■□□□ 1.57
LSM6-203ENST00000503982 CCDC194A0A1B0GVG4 234 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 GPR182O15218 404 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 MAGEB2O15479 319 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 DGKIO75912 1065 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 CLCN3P51790 818 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 PRKCEQ02156 737 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 ANKRD1Q15327 319 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 SPOUT1Q5T280 376 aaKnown RBP24.87■■□□□ 1.57
LSM6-203ENST00000503982 EFCAB12Q6NXP0 572 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 KRT25Q7Z3Z0 450 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 RTN4RL1Q86UN2 441 aaPredicted RBP24.87■■□□□ 1.57
LSM6-203ENST00000503982 BANK1Q8NDB2 785 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 SLC5A5Q92911 643 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 SCLT1Q96NL6 688 aa24.87■■□□□ 1.57
LSM6-203ENST00000503982 C11orf84Q9BUA3 381 aaPredicted RBP24.87■■□□□ 1.57
LSM6-203ENST00000503982 UBE2ZQ9H832 354 aaPredicted RBP24.87■■□□□ 1.57
LSM6-203ENST00000503982 ZBTB42B2RXF5 422 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 RB1P06400 928 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 BMPR1AP36894 532 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 INF2Q27J81 1249 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 LETM2Q2VYF4 491 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 Q4G0T1 1027 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 LRRC71Q8N4P6 559 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 DAGLBQ8NCG7 672 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 ERVK-5Q9HDB9 667 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 ST3GAL5Q9UNP4 418 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 PCDHB7Q9Y5E2 793 aa24.86■■□□□ 1.57
LSM6-203ENST00000503982 MARCH6O60337 910 aa24.85■■□□□ 1.57
LSM6-203ENST00000503982 DTNBO60941 627 aa24.85■■□□□ 1.57
LSM6-203ENST00000503982 KCNA5P22460 613 aa24.85■■□□□ 1.57
LSM6-203ENST00000503982 CRYBB1P53674 252 aaPredicted RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 FAM177A1Q8N128 213 aaPredicted RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 ZNF689Q96CS4 500 aaPredicted RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 TMX1Q9H3N1 280 aa24.85■■□□□ 1.57
LSM6-203ENST00000503982 NSUN3Q9H649 340 aaKnown RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 RNF216Q9NWF9 866 aaPredicted RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 SEPT9Q9UHD8 586 aaPredicted RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 DDX25Q9UHL0 483 aaKnown RBP24.85■■□□□ 1.57
LSM6-203ENST00000503982 TPCN1Q9ULQ1 816 aa24.85■■□□□ 1.57
LSM6-203ENST00000503982 EDIL3O43854 480 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 PFKFB2O60825 505 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 SARSP49591 514 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms