RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TRERF1Q96PN7 1200 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 SGIP1Q9BQI5 828 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 METTL14Q9HCE5 456 aaKnown RBP24.7■■□□□ 1.54
PCDH1-204ENST00000503492 FZD1Q9UP38 647 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 CTDP1Q9Y5B0 961 aaPredicted RBP24.7■■□□□ 1.54
PCDH1-204ENST00000503492 CTAGE15A4D2H0 777 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 VWA5AO00534 786 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 CTAGE8P0CG41 777 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 SLC9A1P19634 815 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 MAGEA1P43355 309 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 BACE1P56817 501 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 PGM5Q15124 567 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 DCAF17Q5H9S7 520 aaPredicted RBP24.69■■□□□ 1.54
PCDH1-204ENST00000503492 CTAGE6Q86UF2 777 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 CTAGE4Q8IX94 777 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 FAM178BQ8IXR5 827 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 SAMD3Q8N6K7 520 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 ANKZF1Q9H8Y5 726 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 PCDHB13Q9Y5F0 798 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 SAR1BQ9Y6B6 198 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 PARP14Q460N5 1801 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 LOXHD1Q8IVV2 1947 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 SEC31AO94979 1220 aaKnown RBP24.69■■□□□ 1.54
PCDH1-204ENST00000503492 P4HBP07237 508 aaKnown RBP24.69■■□□□ 1.54
PCDH1-204ENST00000503492 MAPK7Q13164 816 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 MTMR1Q13613 665 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 ODR4Q5SWX8 454 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 DAW1Q8N136 415 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 BORCS6Q96GS4 357 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 MLXIPQ9HAP2 919 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 FHOD1Q9Y613 1164 aa24.69■■□□□ 1.54
PCDH1-204ENST00000503492 HIP1RO75146 1068 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 RAPGEF1Q13905 1077 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 COG2Q14746 738 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 NFIL3Q16649 462 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 ANGEL2Q5VTE6 544 aaKnown RBP24.68■■□□□ 1.54
PCDH1-204ENST00000503492 SLC35C1Q96A29 364 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 WRNIP1Q96S55 665 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 PLCB1Q9NQ66 1216 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 CAPN6Q9Y6Q1 641 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 MYH11P35749 1972 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 RBAK-RBAKDNI3L0D1 243 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 SRGAP2O75044 1071 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 PTPRAP18433 802 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 TCERG1LQ5VWI1 586 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 AIPL1Q9NZN9 384 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 ZHX2Q9Y6X8 837 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 UBE4BO95155 1302 aa24.68■■□□□ 1.54
PCDH1-204ENST00000503492 ANO9A1A5B4 782 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 PJA2O43164 708 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 PON1P27169 355 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 BMS1Q14692 1282 aaKnown RBP24.67■■□□□ 1.54
PCDH1-204ENST00000503492 R3HDM1Q15032 1099 aaKnown RBP24.67■■□□□ 1.54
PCDH1-204ENST00000503492 PADI6Q6TGC4 694 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 RNF207Q6ZRF8 634 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 ZNF280CQ8ND82 737 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 RIPK3Q9Y572 518 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 MYCLP12524 364 aaPredicted RBP24.67■■□□□ 1.54
PCDH1-204ENST00000503492 EXOC3L4Q17RC7 722 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 CC2D1AQ6P1N0 951 aaPredicted RBP24.67■■□□□ 1.54
PCDH1-204ENST00000503492 NSMFQ6X4W1 530 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 RMDN3Q96TC7 470 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 PDCD2LQ9BRP1 358 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 PXMP2Q9NR77 195 aa24.67■■□□□ 1.54
PCDH1-204ENST00000503492 MOCS3O95396 460 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 PNMA6AP0CW24 399 aaPredicted RBP24.66■■□□□ 1.54
PCDH1-204ENST00000503492 TUBB4BP68371 445 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 GLIPR1L2Q4G1C9 344 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 KLHDC7AQ5VTJ3 777 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 FAM133AQ8N9E0 248 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 MSANTD4Q8NCY6 345 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 TRIM58Q8NG06 486 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 AS3MTQ9HBK9 375 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 FDX1P10109 184 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 CCDC125Q86Z20 511 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 NOA1Q8NC60 698 aaKnown RBP24.66■■□□□ 1.54
PCDH1-204ENST00000503492 TRPM4Q8TD43 1214 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 STRA6Q9BX79 667 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 PICK1Q9NRD5 415 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 TBC1D22BQ9NU19 505 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 SALL4Q9UJQ4 1053 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 PNMA2Q9UL42 364 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 SAMM50Q9Y512 469 aa24.66■■□□□ 1.54
PCDH1-204ENST00000503492 TACC1O75410 805 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 UCHL3P15374 230 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 ARID5AQ03989 594 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 STXBP4Q6ZWJ1 553 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 FAM186BQ8IYM0 893 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 RLFQ13129 1914 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 ATP9AO75110 1047 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 PSMC2P35998 433 aaKnown RBP24.65■■□□□ 1.54
PCDH1-204ENST00000503492 ASIC2Q16515 512 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 MAEAQ7L5Y9 396 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 APOBEC3FQ8IUX4 373 aaKnown RBP24.65■■□□□ 1.54
PCDH1-204ENST00000503492 KRT222Q8N1A0 295 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 PNKPQ96T60 521 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 AGPAT3Q9NRZ7 376 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 RNF146Q9NTX7 359 aa24.65■■□□□ 1.54
PCDH1-204ENST00000503492 DBR1Q9UK59 544 aaKnown RBP24.65■■□□□ 1.54
PCDH1-204ENST00000503492 PPP1R37O75864 691 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms