RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 IRF2BP1Q8IU81 584 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 GPR20Q99678 358 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 LRRC27Q9C0I9 530 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 SEMA6BQ9H3T3 888 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 VTA1Q9NP79 307 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 ANKEF1Q9NU02 776 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 INTS13Q9NVM9 706 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 TBC1D7Q9P0N9 293 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 RWDD2AQ9UIY3 292 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 NFE2L3Q9Y4A8 694 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 MAFBQ9Y5Q3 323 aaPredicted RBP7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 IVNS1ABPQ9Y6Y0 642 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 ZMYM2Q9UBW7 1377 aa7.67□□□□□ -1.18
TOPBP1-203ENST00000503464 ARHGEF35A5YM69 484 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 SMTNL1A8MU46 457 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 BECN2A8MW95 431 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 B4DLN1 442 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 GOLGA6L19H0YKK7 550 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 HIP1RO75146 1068 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 LGR5O75473 907 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 MYBP10242 640 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 TXNP10599 105 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 SMPD1P17405 629 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 ADCYAP1R1P41586 468 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 CCDC173Q0VFZ6 552 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 PSMD2Q13200 908 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 NEDD9Q14511 834 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 DEFB115Q30KQ5 88 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 ZCWPW2Q504Y3 356 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 ANKRD40Q6AI12 368 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 CENPPQ6IPU0 288 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 MIS18BP1Q6P0N0 1132 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 DPP9Q86TI2 863 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 CCDC65Q8IXS2 484 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 GUF1Q8N442 669 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 AFAP1L1Q8TED9 768 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 SCFD2Q8WU76 684 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 SCFD1Q8WVM8 642 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 ATP6V0A1Q93050 837 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 P2RX5Q93086 422 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 TRIM47Q96LD4 638 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 MPHOSPH6Q99547 160 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 TINF2Q9BSI4 451 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 IKZF4Q9H2S9 585 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 KCTD10Q9H3F6 313 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 GPRC5CQ9NQ84 441 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 XPNPEP1Q9NQW7 623 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 PDLIM7Q9NR12 457 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 KCND2Q9NZV8 630 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 FRMPD3Q5JV73 1810 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 EVPLQ92817 2033 aa7.66□□□□□ -1.18
TOPBP1-203ENST00000503464 USO1O60763 962 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 PPP1R37O75864 691 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TBC1D8O95759 1140 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 OATP04181 439 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 KRT18P05783 430 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 ZNF865P0CJ78 1059 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 CCNE1P24864 410 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TCF7P36402 384 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 VEGFBP49765 207 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 SOX10P56693 466 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 FANCCQ00597 558 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 KCNA1Q09470 495 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TTLL4Q14679 1199 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TARBP2Q15633 366 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 BMT2Q1RMZ1 405 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 HERC4Q5GLZ8 1057 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 PRAMEF19Q5SWL8 479 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 KCNV1Q6PIU1 500 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 LRRC55Q6ZSA7 311 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TRMT1LQ7Z2T5 733 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 EMSYQ7Z589 1322 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 MSL3Q8N5Y2 521 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TRPV1Q8NER1 839 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 SEPT1Q8WYJ6 367 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 BSNDQ8WZ55 320 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 EMID1Q96A84 441 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 LENG1Q96BZ8 264 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 DHTKD1Q96HY7 919 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 NAP1L5Q96NT1 182 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 APBA2Q99767 749 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 STRA6Q9BX79 667 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 ZHX3Q9H4I2 956 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 ZNF302Q9NR11 478 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 OLFML3Q9NRN5 406 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 BMP2KQ9NSY1 1161 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 IFNKQ9P0W0 207 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TCEAL9Q9UHQ7 104 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 ODF2LQ9ULJ1 636 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 GABRQQ9UN88 632 aa7.65□□□□□ -1.18
TOPBP1-203ENST00000503464 TNPO2O14787 897 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-203ENST00000503464 PSMA7O14818 248 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms